DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018497
GeneSec31a
SynonymsSec31l1
Desc.Sec31 homolog A (S. cerevisiae)
LocusNM_026969 chr5:100790668-100845253(-)
DB links


Entrez 69162
MGI 1916412
Ensembl ENSMUSG00000035325
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019037
(v2.0)
Sec31aNM_02696969162
44.747742.769373.266924.301420.153416.467342.810265.459913.129215.1382
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018497
(v1.0)
Sec31a69162
Minor ZGA0.99792
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019037
(v2.0)
Sec31a69162
716/4350.2057482/4350.0317192/4352.389441/4351.34610/435-3.2614125/435-2.3844
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019037
(v2.0)
Sec31a69162
373/1460.8361244/1460.6213184/1463.8274420/1462.83456/146-2.365277/146-1.5041
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019037
(v2.0)
Sec31a69162
70.639213950.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019037
(v2.0)
Sec31a69162
19.55358423.28
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
44.484850.510718.072713.946430.2325
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
59.105373.748734.323327.456356.8954
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
46.512916.364755.1083
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
45.401250.003548.5266
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
947.728518.789
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
46.5416.140653.2223
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
16.732513.46589.13511
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
124.00589.6053
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018497
(v1.0)
Sec31aNM_02696969162
60.615320.5494
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018497
(v1.0)
Sec31aNM_02696969162
33.031242.6214
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018497
(v1.0)
12282H3139E12-31810024J13Rik69162
U026446NAP009044-0011810024J13Rik;TC919989,TC919988Q9CVL33.17943.15783.09892.99783.09152.9563.0412
0018497
(v1.0)
16293K0402G09-3Mm.186341810024J13Rik69162
U026446NAP052267-11810024J13Rik;TC919992Q9CVL33.69153.76994.07813.8353.88543.91173.846
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018497
(v1.0)
1453014_a_atMm.18634Sec31aNM_026969.169162
163.4217.47565.925060.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018497
(v1.0)
A_51_P273326Sec31l1XM_13223069162
11P0.6960.171P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018497
(v1.0)
Sec31a69162
21042116