DBTMEE:0018654
| Gene | Set |
| Synonyms | StF-IT-1 |
| Description | SET nuclear oncogene |
| Locus | NM_023871 UCSC: chr2:29917516-29928097(+) OLP: chr2:29917516-29928097(+)
NM_001204875 UCSC: chr2:29921994-29928097(+) OLP: chr2:29921994-29928097(+)
|
| DB links |
Entrez 56086
MGI 1860267
Ensembl ENSMUSG00000054766
Vega OTTMUSG00000016726
|
| Feature | protein-coding |
| GO_BP |
-
 3 Terms
nucleosome assembly (GO:0006334)
negative regulation of neuron apoptotic process (GO:0043524)
negative regulation of transcription, DNA-dependent (GO:0045892)
|
| GO_MF |
-
1 Terms
|
| GO_CC |
-
5 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2019195 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0018654
(v1.0) | Set | NM_023871 | 56086
| 5.94325 | 4.1957 | 202.77 | 506.607 | 101.946 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0018654
(v1.0) | Set | NM_023871 | 56086
| 6.21421 | 13.8297 | 4.5776 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0018654
(v1.0) | Set | NM_023871 | 56086
| 6.06569 | 4.15357 | 1.69437 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0018654
(v1.0) | Set | NM_023871 | 56086
| 6.21782 | 13.6403 | 1.85833 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0018654
(v1.0) | Set | NM_023871 | 56086
| 187.734 | 489.149 | 392.686 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0018654
(v1.0) | Set | NM_023871 | 56086
| 3.09441 | 125.008 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0018654
(v1.0) | Set | NM_023871 | 56086
| 0.571577 | 1.54013 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0018654
(v1.0) | 2502 | C0330D06-3 | Mm.222071 | | | U042274 | NAP041138-1 | Set; | TC879040 | Q9CRT3 | U,F,2 | 2.7323 | 2.7442 | 2.6184 | 2.6824 | 2.6686 | 2.7027 | 2.6535 |
0018654
(v1.0) | 4811 | G0108D08-3 | Mm.28805 | Set | 56086
| U028364 | NAP109910-1 | | TC930699,TC930697,TC930696,TC908842 | Q9CRT3 | U,F,2 | 3.0222 | 3.2304 | 3.6489 | 3.3853 | 3.0852 | 3.4117 | 3.1918 |
0018654
(v1.0) | 9505 | H3082E02-3 | Mm.28805 | Set | 56086
| U042274 | NAP025584-001 | Set; | TC908842 | Q9CRT3 | U,F,2 | 3.2426 | 3.401 | 3.8747 | 4.5379 | 4.3256 | 4.4541 | 4.2528 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0018654
(v1.0) | 1426854_a_at | Mm.335942 | Set | NM_001204875.1,NM_023871.4 | 56086
| 191.225 | 277.3 | 2815.5 | 7504.25 | 3920.8 |
0018654
(v1.0) | 1426853_at | Mm.335942 | Set | NM_001204875.1,NM_023871.4 | 56086
| 103.025 | 112.95 | 440.275 | 1665.62 | 1012.7 |
0018654
(v1.0) | 1421819_a_at | Mm.335942 | Set | NM_001204875.1,NM_023871.4 | 56086
| 0 | 0 | 606.025 | 1694.12 | 790.75 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0018654
(v1.0) | A_52_P212293 | Set | AK031561 | 56086
| 1 | 1 | P | 0.08 | 0.0251 | P |
0018654
(v1.0) | A_52_P619761 | Set | NM_023871 | 56086
| 1 | 1 | P | 0.329 | 0.0702 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0018654
(v1.0) | Set | 56086
| 2 | 2 | 0 | 2 | 3 | 0 |
|
