DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018659
GeneSetd3
SynonymsD12Ertd771e
Desc.SET domain containing 3
LocusNM_028262 chr12:109344641-109417494(-)
DB links


Entrez 52690
MGI 1289184
Ensembl ENSMUSG00000056770
Vega OTTMUSG00000019487
Featureprotein-coding
GO(BP)
GO(MF)
  •   7 Terms
      RNA polymerase II activating transcription factor binding (GO:0001102)
      transcription coactivator activity (GO:0003713)
      methyltransferase activity (GO:0008168)
      transferase activity (GO:0016740)
      histone-lysine N-methyltransferase activity (GO:0018024)
      histone methyltransferase activity (H3-K4 specific) (GO:0042800)
      histone methyltransferase activity (H3-K36 specific) (GO:0046975)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019200
(v2.0)
Setd3NM_02826252690
52.62933.507256.611833.93128.620632.409720.477653.64231.578332.5268
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018659
(v1.0)
Setd352690
Minor ZGA0.97583
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019200
(v2.0)
Setd352690
777/4460.2875491/4460.0224215/4462.5163528/4461.569411/446-3.1716120/446-2.4785
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019200
(v2.0)
Setd352690
449/1900.7249241/1900.2257205/1903.6284494/1902.69372/190-3.958467/190-2.0784
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019200
(v2.0)
Setd352690
41.635217823.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019200
(v2.0)
Setd352690
12.99351468.9
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018659
(v1.0)
Setd3NM_02826252690
34.822639.194425.247119.884114.54
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018659
(v1.0)
Setd3FR104707,FR360513,NM_02826252690
11.843311.112530.55446.736444.68565
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018659
(v1.0)
Setd3NM_02826252690
36.410219.24742.7619
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018659
(v1.0)
Setd3NM_02826252690
35.539938.800839.7436
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018659
(v1.0)
Setd3FR104707,FR360513,NM_02826252690
11.283513.2323
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018659
(v1.0)
Setd3NM_02826252690
36.431318.983443.5894
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018659
(v1.0)
Setd3NM_02826252690
23.374919.198921.8331
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018659
(v1.0)
Setd3FR104707,FR360513,NM_02826252690
6.663487.05562
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018659
(v1.0)
Setd3NM_02826252690
35.64258.5677
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018659
(v1.0)
Setd3NM_02826252690
3.27892.46278
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018659
(v1.0)
18800L0227H06-3Mm.183097D12Ertd771e52690
U034336NAP092553-0012610305M23Rik;D12Ertd771e;TC906073,TC898296,TC806288Q91WC0U,F,23.12473.30983.22883.29013.05323.25123.2279
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018659
(v1.0)
A_51_P439348D12Ertd771eNM_02826252690
11P0.6240.133P
0018659
(v1.0)
A_52_P236777D12Ertd771eAK02940352690
11P0.3790.116P
Proteome N/A