DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018719
GeneSgol1
Synonyms
Desc.shugoshin-like 1 (S. pombe)
LocusNM_028232 chr17:53814112-53828640(-)
DB links


Entrez 72415
MGI 1919665
Ensembl ENSMUSG00000023940
Vega OTTMUSG00000024480
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019259
(v2.0)
Sgol1NM_02823272415
0.26351728.663444.432247.105618.161924.408618.62428.506719.081624.631
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018719
(v1.0)
Sgol172415
Major ZGA0.93573
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019259
(v2.0)
Sgol172415
599/3970.0804468/3970.1209128/3971.9359290/3970.87482/397-0.2152397/397-0.5975
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019259
(v2.0)
Sgol172415
324/1890.2635218/1890.0893124/1892.9148271/1891.837442/189-0.1096165/189-0.7897
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019259
(v2.0)
Sgol172415
55.901912744.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019259
(v2.0)
Sgol172415
15.33748418.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
29.785630.662735.070712.581313.2236
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
49.968452.086985.320433.236244.0221
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
31.14360.096370933.4537
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
30.399330.354821.0549
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
30.241920.6496
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
31.16170.09505123.0923
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
32.4712.147813.1968
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
33.232137.6127
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018719
(v1.0)
Sgol1NM_02823272415
36.695633.5468
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018719
(v1.0)
Sgol1NM_02823272415
4.364338.02429
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018719
(v1.0)
3885C0904F08-3Mm.1532023300001M08Rik72415
U037920NAP095362-0013300001M08Rik;TC899407Q9CXH7U3.20093.14193.21583.02342.97562.88052.894
0018719
(v1.0)
14995J0948B07-3Mm.1532023300001M08Rik72415
U037920NAP095362-0013300001M08Rik;TC899407Q9CXH7U3.03433.11793.18153.28712.7272.97752.9141
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018719
(v1.0)
1418919_atMm.153202Sgol1NM_028232.272415
239.2193.975917.750351.1
0018719
(v1.0)
1439510_atMm.153202Sgol1NM_028232.272415
686.275846.475605.650318.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018719
(v1.0)
A_51_P487999Sgol1NM_02823272415
11P0.5640.11P
Proteome N/A