DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018720
GeneSgol2
SynonymsD1Ertd8e
Tripin
Desc.shugoshin-like 2 (S. pombe)
LocusNM_001177867 chr1:58042184-58082741(+)
NM_199007 chr1:58052818-58083121(+)
DB links


Entrez 68549
MGI 1098767
Ensembl ENSMUSG00000026039
Vega OTTMUSG00000021832
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019260
(v2.0)
Sgol2NM_001177867,NM_19900768549
0.3878624.637932.600624.920222.365949.051814.197416.503221.324939.0367
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018720
(v1.0)
Sgol268549
Minor ZGA0.97987
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019260
(v2.0)
Sgol268549
523/3470.0788368/347-0.031314/347-0.9804109/347-0.3366174/3471.0531120/3471.0889
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019260
(v2.0)
Sgol268549
233/1580.0473160/158-0.09744/158-1.487532/158-0.950978/1581.0203538/1581.1633
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019260
(v2.0)
Sgol268549
54.24127077.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019260
(v2.0)
Sgol268549
20.35362678.28
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
25.596722.478818.541815.500310.1091
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
656.878996.4631318.18718.309242.023
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
26.76370.14184524.5249
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
26.12422.253112.2116
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
24.211213.6585
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
26.77920.13990213.3932
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
17.166814.966214.6999
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
710.599296.119
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
20.992427.4241
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018720
(v1.0)
Sgol2NM_001177867,NM_19900768549
6.0021112.7374
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018720
(v1.0)
1437370_atMm.32800Sgol2NM_199007.2,NM_001177867.168549
1051.025940.6001147.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018720
(v1.0)
A_52_P27020Sgol2NM_19900768549
11P0.9990.991P
0018720
(v1.0)
A_52_P668812Sgol2NM_19900768549
11P1.0550.69P
Proteome N/A