DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018745
GeneSh3bgrl3
Synonyms
Desc.SH3 domain binding glutamic acid-rich protein-like 3
LocusNM_080559 chr4:133683321-133684668(-)
DB links


Entrez 73723
MGI 1920973
Ensembl ENSMUSG00000028843
Vega OTTMUSG00000010335
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019285
(v2.0)
Sh3bgrl3NM_08055973723
1403.29133.77396.525113.693123.4558264.65792.6651164.22824.5551338.29
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018745
(v1.0)
Sh3bgrl373723
Maternal RNA0.97926
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019285
(v2.0)
Sh3bgrl373723
815/596-0.0612353/596-0.8698102/5961.0393326/5960.459217/596-3.0015170/596-2.3987
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019285
(v2.0)
Sh3bgrl373723
397/2260.2988153/226-0.675287/2262.1649280/2261.62964/226-3.466847/226-2.8255
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019285
(v2.0)
Sh3bgrl373723
113.976517864.03
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019285
(v2.0)
Sh3bgrl373723
33.98059037.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
139.09166.642610.17116.270564.96
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
223.09494.297315.695224.474292.9397
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
145.432513.19872.7086
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
141.95665.9735122.193
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
75.2878139.556
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
145.517506.169134.017
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
9.4167915.709817.129
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
23.980627.1442
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018745
(v1.0)
Sh3bgrl3NM_08055973723
122.8355.79994
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018745
(v1.0)
Sh3bgrl3NM_08055973723
14.5246.31636
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018745
(v1.0)
5739H3007C09-3Mm.22240Sh3bgrl373723
U025632NAP010644-001Sh3bgrl3;TC935686Q91VW3U,F,23.32673.46313.28553.31053.18963.45553.4443
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018745
(v1.0)
1416528_atMm.22240Sh3bgrl3NM_080559.173723
336.025228.975128.95158.75267.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018745
(v1.0)
A_51_P344752Sh3bgrl3NM_08055973723
11P1.2740.249P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018745
(v1.0)
Sh3bgrl373723
55322194