DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018751
GeneSh3d19
SynonymsKryn
Desc.SH3 domain protein D19
LocusNM_001082414 chr3:85888356-85934443(+)
DB links


Entrez 27059
MGI 1350923
Ensembl ENSMUSG00000028082
Featureprotein-coding
GO(BP)
  •   3 Terms
      cytoskeleton organization (GO:0007010)
      regulation of cell morphogenesis (GO:0022604)
      positive regulation of membrane protein ectodomain proteolysis (GO:0051044)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019291
(v2.0)
Sh3d19NM_00108241427059
7.3393815.40826.27789.073526.041954.2102410.363425.51224.934894.8746
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018751
(v1.0)
Sh3d1927059
Minor ZGA0.98699
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019291
(v2.0)
Sh3d1927059
596/448-0.1008428/448-0.181716/448-1.157474/448-1.2553183/4480.76061144/4480.7519
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019291
(v2.0)
Sh3d1927059
290/204-0.0053194/204-0.18778/204-0.984847/204-0.773988/2040.8319587/2040.9221
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019291
(v2.0)
Sh3d1927059
101.202813177.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019291
(v2.0)
Sh3d1927059
54.27957869.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
16.017418.14696.747754.18897.21149
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018751
(v1.0)
Sh3d19FR415778,NM_00108241427059
232.654233.21878.844151.958287.9213
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
16.74772.6840919.7987
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
16.347417.964718.871
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
303.399377.551
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
16.75742.6473320.697
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
6.247374.044553.4034
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
46.42347.4367
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018751
(v1.0)
Sh3d19NM_00108241427059
33.567111.0162
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018751
(v1.0)
Sh3d19NM_00108241427059
2.073591.90497
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018751
(v1.0)
13108H3158C08-3Mm.2454Sh3d1927059
U003395NAP094108-001Sh3d19;TC821238O08635U,F,23.27193.20053.18273.20993.21153.21153.245
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018751
(v1.0)
1418460_atMm.2454Sh3d19NM_001082414.227059
27.825.62539.97535.9529.075
Agilent44K N/A
Proteome N/A