DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018773
GeneShc1
Synonymsp66
p66shc
ShcA
Desc.src homology 2 domain-containing transforming protein C1
LocusNM_011368 chr3:89222473-89233951(+)
NM_001113331 chr3:89225543-89233951(+)
DB links


Entrez 20416
MGI 98296
Ensembl ENSMUSG00000042626
Vega OTTMUSG00000022071
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019313
(v2.0)
Shc1NM_001113331,NM_01136820416
23.115818.033638.135513.57914.324436.730153.56741.200714.090943.8476
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018773
(v1.0)
Shc120416
1-Cell Transient0.99548
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019313
(v2.0)
Shc120416
701/4850.0186384/485-0.45279/4850.9655280/4850.53647/485-3.876492/485-2.977
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019313
(v2.0)
Shc120416
332/2230.0611151/223-0.67489/223-0.954340/223-1.12834/223-3.447943/223-2.9305
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019313
(v2.0)
Shc120416
70.811619935.58
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019313
(v2.0)
Shc120416
13.340811112.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018773
(v1.0)
Shc1NM_001113331,NM_01136820416
18.75326.470810.11099.9218937.5492
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018773
(v1.0)
Shc1FR368701,NM_001113331,NM_01136820416
106.031185.1966.38950.3781237.328
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018773
(v1.0)
Shc1NM_001113331,NM_01136820416
19.6088.4537628.8803
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018773
(v1.0)
Shc1NM_001113331,NM_01136820416
19.139426.205130.5443
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018773
(v1.0)
Shc1FR368701,NM_001113331,NM_01136820416
72.4504167.868
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018773
(v1.0)
Shc1NM_001113331,NM_01136820416
19.61948.3379733.5
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018773
(v1.0)
Shc1NM_001113331,NM_01136820416
9.361139.579989.78521
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018773
(v1.0)
Shc1FR368701,NM_001113331,NM_01136820416
46.541247.5876
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018773
(v1.0)
Shc1NM_001113331,NM_01136820416
11.64587.37271
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018773
(v1.0)
Shc1NM_001113331,NM_01136820416
9.3584212.2912
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018773
(v1.0)
9465H3081F12-3Mm.86595Shc120416
U003466NAP095419-001Shc1;TC815169P980832.57442.81472.8922.79482.77742.88152.8322
0018773
(v1.0)
19530L0277F05-3Mm.86595Shc120416
U003466NAP095419-001Shc1;TC815169P980833.10442.89882.87563.02133.16013.03352.9864
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018773
(v1.0)
A_52_P384250Shc1NM_01136820416
11P0.4260.116P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018773
(v1.0)
Shc120416
010010