DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018895
GeneSlc11a2
SynonymsDCT1
DMT1
microcytic anemia, viable anaemia
Nramp2
van
Desc.solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
LocusNM_008732 chr15:100218331-100253486(-)
NM_001146161 chr15:100223089-100253486(-)
DB links


Entrez 18174
MGI 1345279
Ensembl ENSMUSG00000023030
Vega OTTMUSG00000033264
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019437
(v2.0)
Slc11a2NM_001146161,NM_00873218174
12.327314.837.9305832.295648.20484.98810.7717.675642.21124.30458
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018895
(v1.0)
Slc11a218174
MGA0.98476
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019437
(v2.0)
Slc11a218174
719/4560.1438416/456-0.2481101/4561.4027307/4560.7572157/4560.5156953/4560.4632
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019437
(v2.0)
Slc11a218174
382/1570.7662213/1570.322195/1572.784273/1572.111878/1571.0292440/1570.8832
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019437
(v2.0)
Slc11a218174
75.989216645.78
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019437
(v2.0)
Slc11a218174
20.828310420.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018895
(v1.0)
Slc11a2NM_001146161,NM_00873218174
15.39915.4647524.013333.3757.67728
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018895
(v1.0)
Slc11a2FR312904,NM_001146161,NM_00873218174
136.83461.2701147.072181.75633.4289
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018895
(v1.0)
Slc11a2NM_001146161,NM_00873218174
16.10124.508125.96216
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018895
(v1.0)
Slc11a2NM_001146161,NM_00873218174
15.71645.409885.68116
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018895
(v1.0)
Slc11a2FR312904,NM_001146161,NM_00873218174
85.5239116.765
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018895
(v1.0)
Slc11a2NM_001146161,NM_00873218174
16.11064.446376.23091
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018895
(v1.0)
Slc11a2NM_001146161,NM_00873218174
22.232632.224929.1631
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018895
(v1.0)
Slc11a2FR312904,NM_001146161,NM_00873218174
277.767267.566
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018895
(v1.0)
Slc11a2NM_001146161,NM_00873218174
5.317418.99762
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018895
(v1.0)
Slc11a2NM_001146161,NM_00873218174
3.23381.97745
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018895
(v1.0)
6597H3029B01-3Mm.1304Slc11a218174
U036662NAP005627-002Slc11a2;TC842886P49282U,F2.71362.86862.79522.95942.77462.92752.5559
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018895
(v1.0)
1452078_a_atMm.234608Slc11a2NM_001146161.1,NM_008732.218174
444.875222.125146.175314.575105.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018895
(v1.0)
A_51_P388737Slc11a2NM_00873218174
11P0.7230.191P
0018895
(v1.0)
A_52_P254298Slc11a2NM_00873218174
11P1.9350.0996P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018895
(v1.0)
Slc11a218174
2.500.52.501