DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019140
GeneSlc39a6
SynonymsErmelin
Desc.solute carrier family 39 (metal ion transporter), member 6
LocusNM_139143 chr18:24738382-24762318(-)
DB links


Entrez 106957
MGI 2147279
Ensembl ENSMUSG00000024270
Vega OTTMUSG00000033982
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
      zinc ion transmembrane transporter activity (GO:0005385)
      metal ion transmembrane transporter activity (GO:0046873)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019691
(v2.0)
Slc39a6NM_139143106957
11.9001119.474129.86956.997314.46746.906479.7362990.869617.32316.47928
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019140
(v1.0)
Slc39a6106957
Maternal RNA0.92593
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019691
(v2.0)
Slc39a6106957
796/4190.4121540/4190.2493384/4193.4378947/4192.500627/419-1.8599161/419-1.9692
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019691
(v2.0)
Slc39a6106957
413/1650.8071232/1650.3735372/1654.6754895/1653.750513/165-1.537174/165-1.7357
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019691
(v2.0)
Slc39a6106957
71.874817840.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019691
(v2.0)
Slc39a6106957
18.75111416.45
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
124.21389.683842.416910.00286.95928
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
300.633211.86106.62122.360418.3729
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
129.8764.3519897.847
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
126.77188.783367.393
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
273.133225.79
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
129.9514.2923773.9144
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
39.27159.6581412.0559
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
27.316633.2537
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019140
(v1.0)
Slc39a6NM_139143106957
107.12841.7718
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019140
(v1.0)
Slc39a6NM_139143106957
9.0485120.9508
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019140
(v1.0)
1478C0217C12-3Mm.21688Ermelin-pending106957
U038262NAP004384-001Ermelin;TC800484,TC800483U,F,23.30773.7353.3693.42192.85162.91812.7492
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019140
(v1.0)
1424674_atMm.21688Slc39a6NM_139143.3106957
1689.351517.7251499.025118.62563.05
0019140
(v1.0)
1441949_x_atMm.21688Slc39a6NM_139143.3106957
214.925723.025150.12500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019140
(v1.0)
A_51_P259214Slc39a6NM_139143106957
11P1.060.666P
Proteome N/A