DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019160
GeneSlc45a3
SynonymsIPCA-6
Pcanap6
Desc.solute carrier family 45, member 3
LocusNM_001177628 chr1:133859492-133879549(+)
NM_145977 chr1:133867186-133879549(+)
DB links


Entrez 212980
MGI 1922082
Ensembl ENSMUSG00000026435
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019711
(v2.0)
Slc45a3NM_001177628,NM_145977212980
2.27832739.939420.677100.17445.43922.445770.260684535.61867.5271.79611
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019160
(v1.0)
Slc45a3212980
Maternal RNA0.95702
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019711
(v2.0)
Slc45a3212980
740/4790.1145486/479-0.095154/4790.4425264/4790.4697485/4792.06622462/4791.7603
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019711
(v2.0)
Slc45a3212980
383/1990.4299218/1990.015347/1991.464220/1991.4644266/1992.4521203/1991.991
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019711
(v2.0)
Slc45a3212980
67.637913052.03
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019711
(v2.0)
Slc45a3212980
16.71187522.28
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
785.825341.92376.092630.94330.185342
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
1237.11517.424106.95649.12170.225207
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
821.6520.96322373.046
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
802.013338.49481.606
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
506.62802.992
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
822.1290.950016528.209
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
70.449929.87747.6092
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
38.249961.0315
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
264.02119.3229
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019160
(v1.0)
Slc45a3NM_001177628,NM_145977212980
1046.221006.2
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019160
(v1.0)
14203J0422H09-3Mm.2003072210413P12Rik212980
U000791NAP006825-001MGC32471;TC919880U,F,24.5174.74993.46623.64913.10813.1892.9854
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019160
(v1.0)
1426663_s_atMm.200307Slc45a3NM_145977.1,NM_001177628.1212980
3444.956292.51681.600
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019160
(v1.0)
A_51_P124388Pcanap6NM_145977212980
11P0.7160.185P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019160
(v1.0)
Slc45a3212980
132154