DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019280
GeneSlk
Synonyms9A2
Etk4
mSLK
SLK
Stk2
Desc.STE20-like kinase
LocusNM_001164639 chr19:47654509-47719736(+)
NM_009289 chr19:47654509-47719736(+)
DB links


Entrez 20874
MGI 103241
Ensembl ENSMUSG00000025060
Vega OTTMUSG00000029687
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019838
(v2.0)
SlkNM_001164639,NM_00928920874
10.95899.0705215.29487.853538.0546714.474524.959610.95748.7719511.4263
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019280
(v1.0)
Slk20874
1-Cell Transient0.99907
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019838
(v2.0)
Slk20874
523/3260.1686419/3260.2452108/3261.9678225/3260.791681/3260.0483425/326-0.216
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019838
(v2.0)
Slk20874
279/1360.5206195/1360.4011103/1363.0907212/1361.952135/1360.0967150/136-0.4541
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019838
(v2.0)
Slk20874
64.834214345.34
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019838
(v2.0)
Slk20874
17.10579318.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
9.42610.60215.841735.5868217.4494
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
121.545105.91170.210998.9476154.368
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
9.855744.0079611.5671
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
9.6201810.49578.12717
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
9.861473.953068.9136
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
5.408535.394296.06848
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
105.05455.1251
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
23.32679.40584
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019280
(v1.0)
SlkNM_001164639,NM_00928920874
4.369013.30494
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019280
(v1.0)
3258C0624G06-3Mm.7693Stk220874
U019547NAP001127-002Stk2;TC825377O54988U,F,23.75223.64763.40653.32873.70833.45933.6723
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019280
(v1.0)
1449336_a_atMm.281011SlkNM_009289.3,NM_001164639.120874
92168.1136.80165.75
0019280
(v1.0)
1425977_a_atMm.281011SlkNM_009289.3,NM_001164639.120874
65.125145.3560.02550.85109.85
0019280
(v1.0)
1433999_atMm.281011SlkNM_009289.3,NM_001164639.120874
51.580.27539.52551.8139.075
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019280
(v1.0)
A_51_P383140SlkNM_00928920874
11P0.7620.225P
0019280
(v1.0)
A_52_P292959SlkAK12221820874
11P1.4910.218P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019280
(v1.0)
Slk20874
020030