DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019303
GeneSmagp
Synonyms
Desc.small cell adhesion glycoprotein
LocusNM_174992 chr15:100451771-100467286(-)
NM_001033872 chr15:100451771-100467296(-)
DB links


Entrez 207818
MGI 2448476
Ensembl ENSMUSG00000053559
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019861
(v2.0)
SmagpNM_001033872,NM_001285413,NM_001285414,NM_174992,NR_104337,NR_104338207818
15.3198351.494454.61533.575517.082233.66050.666634756.13942.212530.502
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019303
(v1.0)
Smagp207818
Maternal RNA0.98312
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019861
(v2.0)
Smagp207818
819/5090.1731474/509-0.2185116/5091.4459436/5091.1041249/5091.02031366/5090.8236
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019861
(v2.0)
Smagp207818
445/2030.617271/2030.2993111/2032.6593399/2032.292219/2032.14451005/2031.7034
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019861
(v2.0)
Smagp207818
88.904217251.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019861
(v2.0)
Smagp207818
14.89968816.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
381.481322.50226.887112.44250.484925
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
2670.881046.3570.657614.79180.568332
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
398.8746.10404351.857
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
389.34319.264580.216
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
373.626714.76
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
399.1056.02044636.361
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
24.893212.013830.6169
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
24.899336.3644
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
390.145113.162
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019303
(v1.0)
SmagpNM_001033872,NM_174992207818
179.287279.841
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019303
(v1.0)
7842H3054H11-3Mm.26282MGC7903207818
U036671NAP099241-001TC926562,TC926561Q99KC7U,F,23.74613.75753.24383.11853.37543.19923.2776
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019303
(v1.0)
1425108_a_atMm.26282SmagpNM_174992.3,NM_001033872.1207818
1338.7752696.75817.425142.375451.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019303
(v1.0)
A_51_P316616BC004728NM_174992207818
11P0.5260.0981P
Proteome N/A