DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019387
GeneSnap47
SynonymsSNAP-47
Desc.synaptosomal-associated protein, 47
LocusNM_144521 chr11:59220652-59263458(-)
DB links


Entrez 67826
MGI 1915076
Ensembl ENSMUSG00000009894
Vega OTTMUSG00000005789
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      SNARE interactions in vesicular transport (mmu04130)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019963
(v2.0)
Snap47NM_14452167826
14.645852.015632.10911.50015.2087541.091363.267941.08528.0556550.1843
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019387
(v1.0)
Snap4767826
Maternal RNA0.95946
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019963
(v2.0)
Snap4767826
648/509-0.1641420/509-0.3926228/5092.4148506/5091.318556/509-1.1126358/509-1.1038
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019963
(v2.0)
Snap4767826
295/235-0.1839183/235-0.4746182/2353.1676393/2352.061526/235-1.0892159/235-1.1554
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019963
(v2.0)
Snap4767826
67.420512653.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019963
(v2.0)
Snap4767826
23.95378129.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019387
(v1.0)
Snap47NM_14452167826
54.054322.32228.562993.6286144.6319
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019387
(v1.0)
Snap47NM_14452167826
83.867925.726812.81176.0845364.5195
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019387
(v1.0)
Snap47NM_14452167826
56.51885.3561124.354
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019387
(v1.0)
Snap47NM_14452167826
55.167922.09830.4498
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019387
(v1.0)
Snap47NM_14452167826
24.931834.6519
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019387
(v1.0)
Snap47NM_14452167826
56.55165.2827533.3963
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019387
(v1.0)
Snap47NM_14452167826
7.927993.503575.57131
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019387
(v1.0)
Snap47NM_14452167826
4.291536.65512
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019387
(v1.0)
Snap47NM_14452167826
27.932713.2351
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019387
(v1.0)
Snap47NM_14452167826
9.095463.60238
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019387
(v1.0)
19016L0242E04-3Mm.266801110031B06Rik67826
U032846NAP002726-0011110031B06Rik;TC9406213.40293.39273.3213.34143.51933.43663.4392
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019387
(v1.0)
1423745_atMm.26680Snap47NM_144521.267826
485.975261.075253.10165.575
0019387
(v1.0)
1438176_x_atMm.26680Snap47NM_144521.267826
2596.9751238.6751020.975482.151158.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019387
(v1.0)
A_52_P2310791110031B06RikNM_14452167826
11P0.910.52P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019387
(v1.0)
Snap4767826
110110