DBTMEE:0019857
| Gene | Srp54a |
| Synonyms | 54K subunit of signal recognition particle
54kDa
Srp54 |
| Description | signal recognition particle 54A |
| Locus | NM_011899 UCSC: chr12:56181483-56216354(+) OLP: chr12:56181483-56216354(+)
NM_011899 UCSC: chr12:56256327-56365681(+) OLP: chr12:56256327-56365681(+)
|
| DB links |
Entrez 24067
MGI 1346087
Ensembl ENSMUSG00000073079
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
|
| GO_MF |
-
6 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2020443 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0019857
(v1.0) | Srp54a_dup1 | NM_011899_dup1 | 24067
| 1.1009 | 0.622786 | 0.249708 | 0.250703 | 0.1712 | |
0019857
(v1.0) | Srp54a | NM_001100109,NM_001100110,NM_011899 | 24067
| 40.026 | 15.7174 | 5.14243 | 4.02141 | 2.38205 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0019857
(v1.0) | Srp54a_dup1 | NM_011899_dup1 | 24067
| 1.1511 | 0.224524 | 0.679473 |
0019857
(v1.0) | Srp54a | NM_001100109,NM_001100110,NM_011899 | 24067
| 41.8509 | 1.27731 | 17.148 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0019857
(v1.0) | Srp54a_dup1 | NM_011899_dup1 | 24067
| 1.12358 | 0.616533 | 0.901691 |
0019857
(v1.0) | Srp54a | NM_001100109,NM_001100110,NM_011899 | 24067
| 40.8506 | 15.5596 | 16.0772 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0019857
(v1.0) | Srp54a_dup1 | NM_011899_dup1 | 24067
| 1.15176 | 0.221449 | 0.988944 |
0019857
(v1.0) | Srp54a | NM_001100109,NM_001100110,NM_011899 | 24067
| 41.8752 | 1.25982 | 17.6329 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0019857
(v1.0) | Srp54a_dup1 | NM_011899_dup1 | 24067
| 0.231191 | 0.242064 | 0.35931 |
0019857
(v1.0) | Srp54a | NM_001100109,NM_001100110,NM_011899 | 24067
| 4.76109 | 3.88283 | 4.10567 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0019857
(v1.0) | Srp54a_dup1 | NM_011899_dup1 | 24067
| 0.57058 | 0.00794765 |
0019857
(v1.0) | Srp54a | NM_001100109,NM_001100110,NM_011899 | 24067
| 15.1857 | 2.63213 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0019857
(v1.0) | Srp54a_dup1 | NM_011899_dup1 | 24067
| 0.128891 | 0.133009 |
0019857
(v1.0) | Srp54a | NM_001100109,NM_001100110,NM_011899 | 24067
| 2.29683 | 1.96157 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0019857
(v1.0) | 8572 | H3068D05-3 | | Srp54 | 24067
| U033956 | NAP122924-1 | | | | U,F | 2.4974 | 2.5151 | 2.521 | 2.4506 | 2.3638 | 2.364 | 2.3574 |
0019857
(v1.0) | 18118 | L0062G06-3 | Mm.12848 | Srp54 | 24067
| U043277 | NAP109412-1 | Srp54; | TC903831,TC844364 | P14576 | U,F,2 | 3.7743 | 3.826 | 3.3632 | 3.441 | 3.1847 | 3.3722 | 3.3545 |
|
| MOE430 |
N/A |
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0019857
(v1.0) | A_51_P420901 | Srp54 | NM_011899 | 24067
| 1 | 1 | P | 0.761 | 0.225 | P |
0019857
(v1.0) | A_52_P279184 | Srp54 | NM_011899 | 24067
| 1 | 1 | P | 0.172 | 0.059 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0019857
(v1.0) | Srp54a | 24067
| 3 | 2 | 0 | 3 | 2 | 0 |
|
