DBTMEE:0019895
| Gene | Ssbp3 |
| Synonyms | |
| Description | single-stranded DNA binding protein 3 |
| Locus | NM_198438 UCSC: chr4:106584075-106722299(+) OLP: chr4:106584075-106722299(+)
NM_023672 UCSC: chr4:106584075-106722299(+) OLP: chr4:106584075-106722299(+)
|
| DB links |
Entrez 72475
MGI 1919725
Ensembl ENSMUSG00000061887
Vega OTTMUSG00000008276
|
| Feature | protein-coding |
| GO_BP |
-
 12 Terms
transcription, DNA-dependent (GO:0006351)
regulation of transcription, DNA-dependent (GO:0006355)
protein complex assembly (GO:0006461)
positive regulation of cell proliferation (GO:0008284)
prechordal plate formation (GO:0021501)
midbrain-hindbrain boundary initiation (GO:0021547)
negative regulation of apoptotic process (GO:0043066)
positive regulation of transcription, DNA-dependent (GO:0045893)
positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
head development (GO:0060322)
head morphogenesis (GO:0060323)
positive regulation of anterior head development (GO:2000744)
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
2 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2020482 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0019895
(v1.0) | Ssbp3 | NM_023672,NM_198438 | 72475
| 26.4923 | 26.8422 | 11.1635 | 5.27522 | 9.35289 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0019895
(v1.0) | Ssbp3 | NM_023672,NM_198438 | 72475
| 27.7002 | 3.79612 | 29.2854 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0019895
(v1.0) | Ssbp3 | NM_023672,NM_198438 | 72475
| 27.0381 | 26.5726 | 37.7312 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0019895
(v1.0) | Ssbp3 | NM_023672,NM_198438 | 72475
| 27.7163 | 3.74412 | 41.3823 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0019895
(v1.0) | Ssbp3 | NM_023672,NM_198438 | 72475
| 10.3357 | 5.09344 | 5.89426 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0019895
(v1.0) | Ssbp3 | NM_023672,NM_198438 | 72475
| 13.8695 | 5.47885 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0019895
(v1.0) | Ssbp3 | NM_023672,NM_198438 | 72475
| 12.0462 | 14.4164 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0019895
(v1.0) | 18407 | L0206A04-3 | Mm.198857 | Ssbp3 | 72475
| | NAP034657-1 | | TC810372 | Q9D032 | | 4.2259 | 4.4177 | 4.8935 | 4.6867 | 4.3829 | 4.5755 | 4.3581 |
0019895
(v1.0) | 21591 | L0862G11-3 | Mm.195635 | Ssbp3 | 72475
| U042559 | NAP095424-001 | 2610200M23Rik; | TC810372 | Q9D032 | U,F,2 | 2.5395 | 2.3689 | 2.418 | 2.493 | 2.6999 | 2.6967 | 2.8652 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0019895
(v1.0) | 1427917_s_at | Mm.195635 | Ssbp3 | NM_023672.2,NM_198438.1 | 72475
| 182 | 0 | 0 | 0 | 156.075 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0019895
(v1.0) | A_51_P109668 | Ssbp3 | NM_023672 | 72475
| 1 | 1 | P | 0.691 | 0.168 | P |
0019895
(v1.0) | A_52_P627863 | Ssbp3 | NM_023672 | 72475
| 1 | 1 | P | 2.011 | 0.121 | P |
|
| Proteome |
N/A |
