DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019906
GeneSsr2
SynonymsTRAPbeta
Desc.signal sequence receptor, beta
LocusNM_025448 chr3:88383593-88392335(+)
DB links


Entrez 66256
MGI 1913506
Ensembl ENSMUSG00000041355
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020494
(v2.0)
Ssr2NM_02544866256
92.269918.49716.68796113.865123.571266.147100.4999.01601133.702327.314
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019906
(v1.0)
Ssr266256
Major ZGA0.99791
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020494
(v2.0)
Ssr266256
455/358-0.1664355/358-0.12897/3581.6839385/3581.429865/358-0.3983449/358-0.2718
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020494
(v2.0)
Ssr266256
237/194-0.2227200/194-0.071993/1942.4682366/1942.232429/194-0.6659137/194-1.0928
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020494
(v2.0)
Ssr266256
81.131212067.61
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020494
(v2.0)
Ssr266256
22.84915938.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
19.234.6276584.820985.964671.5454
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
47.534813.5371247.668270.338188.449
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
20.106833.7445.04886
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
19.62624.581186.68842
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
15.08824.1703
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
20.118533.28197.33563
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
78.530983.002392.4462
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
213.349212.015
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019906
(v1.0)
Ssr2NM_02544866256
3.3001425.3157
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019906
(v1.0)
Ssr2NM_02544866256
2.242181.98327
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019906
(v1.0)
18523L0211C08-3Ssr266256
U003442NAP093751-0011500032E05Rik;TC830401,TC830398,TC830396Q91Z43U,F,22.99612.95933.8324.52674.04174.22224.2847
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019906
(v1.0)
1449930_a_atMm.7091Ssr2NM_025448.366256
51.30248.6327.925516.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019906
(v1.0)
A_51_P314264Ssr2NM_02544866256
11P2.8750.0676P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019906
(v1.0)
Ssr266256
110120