DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019908
GeneSsr4
SynonymsTrap
Desc.signal sequence receptor, delta
LocusNM_001166480 chrX:71032367-71036167(+)
NM_009279 chrX:71032482-71036167(+)
DB links


Entrez 20832
MGI 1099464
Ensembl ENSMUSG00000002014
Vega OTTMUSG00000018078
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020496
(v2.0)
Ssr4NM_001166480,NM_00927920832
427.17520.96111.005136.6235122.593218.149135.45410.1641157.124240.074
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019908
(v1.0)
Ssr420832
MGA0.93476
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020496
(v2.0)
Ssr420832
409/326-0.185237/326-0.574150/3262.438407/3261.64392/326-4.724351/326-3.2378
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020496
(v2.0)
Ssr420832
206/146-0.016118/146-0.42148/1463.5152374/1462.66761/146-4.172622/146-3.2435
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020496
(v2.0)
Ssr420832
33.872410831.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020496
(v2.0)
Ssr420832
10.32698312.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
21.79287.5671827.292785.124696.3224
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
132.13259.7381148.587813.735656.233
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
22.7863156.2258.25596
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
22.24177.49127.50467
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
50.603115.6069
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
22.7996154.0858.23087
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
25.268882.1912108.585
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
108.111140.462
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
4.1606114.1419
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019908
(v1.0)
Ssr4NM_001166480,NM_00927920832
5.490880.628574
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019908
(v1.0)
7372H3047A07-3Ssr420832
Ssr42.94893.00673.19773.4323.16173.33463.1755
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019908
(v1.0)
1448524_s_atMm.831Ssr4NM_001166480.1,NM_009279.320832
190.850.65121.875714.6888.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019908
(v1.0)
A_51_P174463Ssr4NM_00927920832
11P0.7320.204P
0019908
(v1.0)
A_52_P546090Ssr4NM_00927920832
11P0.8880.446P
Proteome N/A