DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019920
GeneSsu72
Synonyms
Desc.Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
LocusNM_026899 chr4:155078924-155107982(+)
DB links


Entrez 68991
MGI 1916241
Ensembl ENSMUSG00000029038
Vega OTTMUSG00000010846
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020508
(v2.0)
Ssu72NM_02689968991
38.348226.030151.698248.245162.168367.718320.970253.367252.483686.9532
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019920
(v1.0)
Ssu7268991
MGA0.98646
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020508
(v2.0)
Ssu7268991
680/4510.0794402/451-0.2814304/4512.9984704/4511.967816/451-2.685150/451-2.1762
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020508
(v2.0)
Ssu7268991
314/1860.2414192/186-0.07291/1864.1606669/1863.16085/186-2.928345/186-2.6066
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020508
(v2.0)
Ssu7268991
54.32614637.21
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020508
(v2.0)
Ssu7268991
15.633710115.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019920
(v1.0)
Ssu72NM_02689968991
27.059835.787635.971543.219915.0157
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019920
(v1.0)
Ssu72FR352344,NM_02689968991
131.354149.179138.104195.29461.9795
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019920
(v1.0)
Ssu72NM_02689968991
28.293514.024339.045
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019920
(v1.0)
Ssu72NM_02689968991
27.617235.428239.5761
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019920
(v1.0)
Ssu72FR352344,NM_02689968991
288.841267.616
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019920
(v1.0)
Ssu72NM_02689968991
28.309913.832343.4057
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019920
(v1.0)
Ssu72NM_02689968991
33.30441.730536.1511
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019920
(v1.0)
Ssu72FR352344,NM_02689968991
213.923186.504
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019920
(v1.0)
Ssu72NM_02689968991
20.803834.2259
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019920
(v1.0)
Ssu72NM_02689968991
106.49495.9646
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019920
(v1.0)
11129H3108G11-3Mm.19851500011L16Rik68991
U005213NAP093330-0011500011L16Rik;TC930620,TC930619,TC930618Q9CY97U,F,24.26934.29553.73924.04853.97564.13054.0217
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019920
(v1.0)
1425674_a_atMm.294770Ssu72NM_026899.368991
359.275571.925354.125611.45404.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019920
(v1.0)
A_51_P145991Ssu72NM_02689968991
11P0.7060.188P
0019920
(v1.0)
A_51_P145993Ssu72NM_02689968991
11P1.2460.271P
Proteome N/A