DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020023
GeneStk38l
SynonymsNdr2
Desc.serine/threonine kinase 38 like
LocusNM_172734 chr6:146673452-146727336(+)
DB links


Entrez 232533
MGI 1922250
Ensembl ENSMUSG00000001630
Vega OTTMUSG00000025646
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020612
(v2.0)
Stk38lNM_172734232533
2.214210.864411.999353.503515.78988.8697.676638.1451816.346510.3409
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020023
(v1.0)
Stk38l232533
2-Cell Transient0.98958
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020612
(v2.0)
Stk38l232533
706/3730.4067501/3730.308798/3731.6412267/3730.8446103/3730.1992725/3730.3586
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020612
(v2.0)
Stk38l232533
342/1610.5712250/1610.51690/1612.6731244/1611.914624/161-0.6661189/161-0.3654
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020612
(v2.0)
Stk38l232533
37.115912629.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020612
(v2.0)
Stk38l232533
2.8761893.23
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
11.29418.3108939.846910.95525.40507
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
13.132835.5395229.89663.801929.7877
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
11.8090.8097569.06736
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
11.52678.227446.0313
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
105.274105.478
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
11.81590.7986656.61493
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
36.89210.577711.298
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
41.522630.9981
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020023
(v1.0)
Stk38lNM_172734232533
8.9102416.7053
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020023
(v1.0)
Stk38lNM_172734232533
6.474744.20964
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020023
(v1.0)
1455183_atMm.322121Stk38lNM_172734.3232533
0270.375495.5456.975425.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020023
(v1.0)
A_51_P519984Stk38lNM_172734232533
11P1.1080.542P
0020023
(v1.0)
A_52_P320945Stk38lNM_172734232533
11P1.1340.429P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020023
(v1.0)
Stk38l232533
011011