DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020042
GeneStra13
Synonyms
Desc.stimulated by retinoic acid 13
LocusNM_016665 chr11:120572255-120575081(-)
DB links


Entrez 20892
MGI 894324
Ensembl ENSMUSG00000025144
Vega OTTMUSG00000004086
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020632
(v2.0)
Stra13NM_01666520892
90.8979110.991129.76814.865827.952140.24328.2273166.17932.449165.176
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020042
(v1.0)
Stra1320892
Maternal RNA0.98109
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020632
(v2.0)
Stra1320892
916/653-0.0245422/653-0.7445172/6531.6582444/6530.772516/653-3.2149260/653-1.9217
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020632
(v2.0)
Stra1320892
384/2490.1117158/249-0.7683101/2492.2448224/2491.17068/249-2.7562107/249-1.8034
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020632
(v2.0)
Stra1320892
94.711519548.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020632
(v2.0)
Stra1320892
20.704411717.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020042
(v1.0)
Stra13NM_01666520892
115.36790.091811.047319.411220.1976
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020042
(v1.0)
Stra13NM_01666520892
241.642290.07926.9111113.92154.9913
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020042
(v1.0)
Stra13NM_01666520892
120.62733.242398.2921
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020042
(v1.0)
Stra13NM_01666520892
117.74489.1872123.314
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020042
(v1.0)
Stra13NM_01666520892
114.744156.009
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020042
(v1.0)
Stra13NM_01666520892
120.69732.787135.246
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020042
(v1.0)
Stra13NM_01666520892
10.228118.742322.5592
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020042
(v1.0)
Stra13NM_01666520892
1022.72420.957
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020042
(v1.0)
Stra13NM_01666520892
42.151542.0471
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020042
(v1.0)
Stra13NM_01666520892
139.805111.131
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020042
(v1.0)
3008C0501D01-3Mm.73550Stra1320892
U019337NAP000111-002Cdc37l;TC930733,TC927313Q9CZP7U,F,22.06482.24552.32552.07492.14832.0912.2364
0020042
(v1.0)
20054L0518A12-3Mm.73550Stra1320892
U033731NAP011917-001Stra13;TC899369,TC810367O08693U4.03924.12054.41264.1844.04944.15974.0574
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020042
(v1.0)
1416553_atMm.259716Stra13NM_016665.220892
191.525288.475101.87585.75133.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020042
(v1.0)
A_52_P124429Stra13NM_01666520892
11P1.3780.192P
Proteome N/A