DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020114
GeneSumo1
SynonymsPIC1
SENTRIN
Smt3C
Ubl1
Desc.SMT3 suppressor of mif two 3 homolog 1 (yeast)
LocusNM_009460 chr1:59696278-59727678(-)
DB links


Entrez 22218
MGI 1197010
Ensembl ENSMUSG00000026021
Vega OTTMUSG00000022159
Featureprotein-coding
GO(BP)
  •   11 Terms
      regulation of transcription, DNA-dependent (GO:0006355)
      response to stress (GO:0006950)
      protein sumoylation (GO:0016925)
      PML body organization (GO:0030578)
      positive regulation of protein complex assembly (GO:0031334)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      negative regulation of DNA binding (GO:0043392)
      negative regulation of sequence-specific DNA binding transcription factor activity (GO:0043433)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      palate development (GO:0060021)
      protein localization to nuclear pore (GO:0090204)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020708
(v2.0)
Sumo1NM_00946022218
38.125551.3832146.725208.131298.012233.09743.7383102.628251.87257.65
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020114
(v1.0)
Sumo122218
Major ZGA0.94006
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020708
(v2.0)
Sumo122218
618/3120.472449/3120.4078198/3122.8972441/3121.822220/312-1.8544146/312-1.6847
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020708
(v2.0)
Sumo122218
313/1450.5939215/1450.4494190/1453.8826412/1452.81664/145-2.84152/145-2.0473
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020708
(v2.0)
Sumo122218
33.906410233.24
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020708
(v2.0)
Sumo122218
14.54137918.41
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
53.3702101.464154.839207.03730.9957
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
4.5252912.759512.937815.41223.86927
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
55.803413.9429110.699
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
54.4697100.44575.9382
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
12.951429.8681
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
55.835913.751983.2864
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
143.357199.902173.526
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
15.245715.3097
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020114
(v1.0)
Sumo1NM_00946022218
26.8426251.23
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020114
(v1.0)
Sumo1NM_00946022218
70.309761.9925
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020114
(v1.0)
1067C0176B06-3Mm.7353Ubl122218
U021371NAP090965-1TC798832,TC798830U,F,24.23154.53513.95474.33164.284.35524.087
0020114
(v1.0)
20076L0519B08-3Mm.7353Ubl122218
U040726NAP031664-1Mylc;TC881177P095423.30033.27573.70653.47943.41653.54953.3607
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020114
(v1.0)
1451005_atMm.362118Sumo1NM_009460.222218
968.21447.5751928.137261733.75
0020114
(v1.0)
1438289_a_atMm.362118Sumo1NM_009460.222218
1217.5251788.1252320.14030.3251918.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020114
(v1.0)
A_51_P104187Sumo1NM_00946022218
11P1.0040.973P
Proteome N/A