DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020129
GeneSurf1
SynonymsSurf-1
Desc.surfeit gene 1
LocusNM_001271724 chr2:26768898-26772050(-)
NM_013677 chr2:26768898-26772050(-)
NR_073420 chr2:26768898-26772050(-)
DB links


Entrez 20930
MGI 98443
Ensembl ENSMUSG00000015790
Vega OTTMUSG00000011739
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020724
(v2.0)
Surf1NM_001271724,NM_013677,NR_07342020930
27.387341.193511.11538.7200611.397839.724722.83219.5445917.712644.6214
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020129
(v1.0)
Surf120930
Maternal RNA0.99752
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020724
(v2.0)
Surf120930
727/622-0.2873368/622-0.8715171/6221.7187483/6220.96366/622-4.425388/622-3.3984
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020724
(v2.0)
Surf120930
367/278-0.1117168/278-0.8387127/2782.4205358/2781.68724/278-3.760737/278-3.4561
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020724
(v2.0)
Surf120930
82.034615353.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020724
(v2.0)
Surf120930
17.81538321.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020129
(v1.0)
Surf1NM_01367720930
41.20657.376516.248357.5703715.5758
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020129
(v1.0)
Surf1NM_01367720930
587.59362.256752.5011105.763173.862
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020129
(v1.0)
Surf1NM_01367720930
43.08519.872218.04794
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020129
(v1.0)
Surf1NM_01367720930
42.05547.302456.96067
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020129
(v1.0)
Surf1NM_01367720930
82.577184.8755
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020129
(v1.0)
Surf1NM_01367720930
43.11029.736997.63423
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020129
(v1.0)
Surf1NM_01367720930
5.784997.3094912.1283
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020129
(v1.0)
Surf1NM_01367720930
55.877773.182
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020129
(v1.0)
Surf1NM_01367720930
8.882869.49952
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020129
(v1.0)
Surf1NM_01367720930
5.043944.87283
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020129
(v1.0)
17683L0006F01-3Mm.6874Surf120930
U022433NAP036748-1Surf1;TC930900,TC930899,TC930896,TC930895U,F,23.15863.20953.31463.5933.4973.74363.7035
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020129
(v1.0)
1450561_a_atMm.347512Surf1NM_013677.220930
704.925196.025105.925221.15345.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020129
(v1.0)
A_51_P332602Surf1NM_01367720930
11P1.0640.65P
Proteome N/A