DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020270
GeneTaf1
SynonymsCcg-1
Ccg1
KAT4
Taf2a
Desc.TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_001081008 chrX:98728074-98797128(+)
DB links


Entrez 270627
MGI 1336878
Ensembl ENSMUSG00000031314
Vega OTTMUSG00000018200
Featureprotein-coding
GO(BP)
  •   12 Terms
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020868
(v2.0)
Taf1NM_001290729270627
3.681574.721567.7982212.946414.42856.7643512.24964.9303815.86955.72302
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020270
(v1.0)
Taf1270627
MGA0.91997
SPR_Histone_Erkek_+-5KfromTSS N/A
SPR_Histone_Erkek_+-2KfromTSS N/A
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020868
(v2.0)
Taf1270627
48.032410346.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020868
(v2.0)
Taf1270627
20.13346730.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
4.846475.319479.553799.907358.4136
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
52.417743.462274.3104124.534128.761
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
5.067431.336955.80366
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
4.946315.266063.5852
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
44.909623.4876
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
5.070371.318633.93213
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
8.845329.5659410.8326
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
96.5559113.187
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020270
(v1.0)
Taf1NM_001081008270627
4.805847.25089
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020270
(v1.0)
Taf1NM_001081008270627
1.519031.8907
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020270
(v1.0)
1455513_atMm.261750Taf1NM_001081008.1270627
186.525345.8388.075474.525586.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020270
(v1.0)
A_52_P394211Taf1XM_194622270627
11P1.3030.247P
Proteome N/A