DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020433
GeneTcea1
SynonymsS-II
Desc.transcription elongation factor A (SII) 1
LocusNM_011541 chr1:4847775-4887990(+)
NM_001159750 chr1:4847775-4887990(+)
NM_001159751 chr1:4848409-4887990(+)
DB links


Entrez 21399
MGI 1196624
Ensembl ENSMUSG00000033813
Vega OTTMUSG00000042348
Featureprotein-coding
GO(BP)
  •   7 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      erythrocyte differentiation (GO:0030218)
      regulation of DNA-dependent transcription, elongation (GO:0032784)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021038
(v2.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
47.939195.5052211.615201.207227.38373.565354.612122.598164.71972.4714
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020433
(v1.0)
Tcea121399
2-Cell Transient0.82641
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021038
(v2.0)
Tcea121399
592/3780.1341441/3780.1059254/3782.9876670/3782.149617/378-2.3503129/378-2.1373
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021038
(v2.0)
Tcea121399
288/1610.3244194/1610.1519242/1614.0901638/1613.29776/161-2.502671/161-1.759
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021038
(v2.0)
Tcea121399
43.301411836.7
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021038
(v2.0)
Tcea121399
10.31588112.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
99.2226145.929149.624157.76138.5674
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
8.4384211.855912.306312.43883.51258
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
103.74617.5319159.212
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
101.267144.46490.7133
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
12.039111.4375
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
103.80717.291799.4913
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
138.528152.325113.517
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
12.30449.32002
Illumina_Oo-2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020433
(v1.0)
Tcea1NM_001159750,NM_001159751,NM_01154121399
57.879181.99
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020433
(v1.0)
1268C0191H10-3Mm.218669Tcea121399
TC9064251.69561.88161.94481.8051.55441.6181.9089
0020433
(v1.0)
1441C0212A07-3Mm.218669Tcea121399
NAP031002-1TC8389103.38643.35533.31313.27783.17433.20413.1751
0020433
(v1.0)
3604C0832C03-3Mm.218669Tcea121399
U036980NAP103935-1U,F,22.15332.43242.39912.45962.24272.53892.5722
0020433
(v1.0)
4628C0945D09-3Mm.218669Tcea121399
2.74073.00642.97433.12952.82793.06372.9158
0020433
(v1.0)
4958G0116E10-3Mm.218669Tcea121399
Tcea13.12353.03663.11283.01633.00763.02862.9845
0020433
(v1.0)
5482H3001C03-3Mm.218669Tcea121399
U026744NAP037075-1TC9004133.03252.91182.89132.94973.45593.22043.3615
0020433
(v1.0)
9540H3083A02-3Mm.218669Tcea121399
NAP049018-1TC8118302.14172.29242.31952.30272.42252.28212.3594
0020433
(v1.0)
11710H3121H01-3Mm.218669Tcea121399
U022428NAP031113-1TC8328362.74722.66152.84742.91933.06213.20823.0336
0020433
(v1.0)
16432K0417C12-3Mm.218669Tcea121399
3.2533.14363.02123.083.1593.12153.0905
0020433
(v1.0)
19214L0257G07-3Mm.218669Tcea121399
2.58652.44462.58492.44822.79912.70592.6723
0020433
(v1.0)
19696L0291H05-3Tcea121399
U042461NAP034176-1TC9060442.91842.99742.76722.85422.81232.78262.726
0020433
(v1.0)
19776L0303G10-3Mm.218669Tcea121399
NAP050196-1TC8224312.74772.64972.81982.72662.73462.82132.6496
0020433
(v1.0)
20198L0529A10-3Tcea121399
NAP017022-001TC8067162.18482.47072.44392.42912.21552.40062.2233
0020433
(v1.0)
21251L0842B01-3Mm.218669Tcea121399
NAP031171-13.06073.06142.55382.92893.23983.02283.0716
0020433
(v1.0)
21809L0914D01-3Mm.218669Tcea121399
NAP031262-12.99663.01143.46063.1523.12733.07572.9907
0020433
(v1.0)
22353L0959C06-3Mm.218669Tcea121399
NAP039491-1TC9160243.10673.13753.61783.37832.90233.2272.805
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020433
(v1.0)
1419257_atMm.207263Tcea1NM_011541.4,NM_001159750.1,NM_001159751.121399
702.61075.51908.375672.5209.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020433
(v1.0)
A_51_P400096Tcea1NM_01154121399
11P0.790.256P
0020433
(v1.0)
A_52_P417654Tcea1NM_01154121399
11P1.4820.158P
0020433
(v1.0)
A_52_P466648Tcea1D0092521399
11P0.9630.793P
0020433
(v1.0)
A_52_P493079Tcea1M1820921399
11P0.8040.274P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020433
(v1.0)
Tcea121399
0.5220.5319