DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0020455

Gene

Tcf3

Synonyms

Tcf7l1

Description

transcription factor 7 like 1 (T cell specific, HMG box)

Locus

NM_011548 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164147 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164150 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164149 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164148 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164151 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164153 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164152 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)

DB links

Entrez 21423
MGI 98510
Ensembl ENSMUSG00000020167
Vega OTTMUSG00000019126

Feature

protein-coding

GO_BP

25 Terms

GO_MF

16 Terms

GO_CC

5 Terms

KEGG

see DBTMEE:2021062 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0020455 (v1.0)	Tcf3	NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_011548	21423	18.3892	14.8022	7.72035	5.98059	26.395

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0020455 (v1.0)	Tcf3	NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_011548	21423	19.2276	4.71055	16.1495

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0020455 (v1.0)	Tcf3	NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_011548	21423	18.7681	14.6535	19.6212

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0020455 (v1.0)	Tcf3	NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_011548	21423	19.2388	4.64603	21.5199

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0020455 (v1.0)	Tcf3	NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_011548	21423	7.14784	5.7745	5.20022

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0020455 (v1.0)	Tcf3	NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_011548	21423	6.23628	4.08808

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0020455 (v1.0)	Tcf3	NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_011548	21423	13.9449	11.5081

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0020455 (v1.0)	18893	L0233F11-3	Mm.3406	Tcfe2a	21423	U032010	NAP010932-001	Tcfe2a;	TC926725,TC809300	P15806	U,F,2	3.5105	3.5658	3.5461	3.5102	2.8226	3.0717	2.886

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0020455 (v1.0)	1426297_at	Mm.3406	Tcf3	NM_001164147.1,NM_001164148.1,NM_001164149.1,NM_001164150.1,NM_001164152.1,NM_001164151.1,NM_011548.4,NM_001164153.1	21423	0	198.95	0	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0020455 (v1.0)	A_51_P156547	Tcf3	NM_009332	21423	1	1	P	0.472	0.0941	P
0020455 (v1.0)	A_51_P394471	Tcfe2a	NM_011548	21423	1	1	P	2.192	0.0805	P

N/A