DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021248
GeneTra2a
SynonymsmAWMS1
Desc.transformer 2 alpha homolog (Drosophila)
LocusNM_198102 chr6:49193920-49214051(-)
DB links


Entrez 101214
MGI 1933972
Ensembl ENSMUSG00000029817
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021872
(v2.0)
Tra2aNM_198102101214
17.61096.865244.8527369.0332201.337109.17250.20725.10889171.855129.005
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021248
(v1.0)
Tra2a101214
MGA0.98652
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021872
(v2.0)
Tra2a101214
691/3430.4964507/3430.4465526/3434.17051503/3433.453371/343-0.2118500/343-0.0555
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021872
(v2.0)
Tra2a101214
385/1420.9214254/1420.7188514/1425.34141403/1424.611513/142-1.3263110/142-0.9581
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021872
(v2.0)
Tra2a101214
50.753912739.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021872
(v2.0)
Tra2a101214
11.75228114.51
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021248
(v1.0)
Tra2aNM_198102101214
7.133463.3570251.3778139.48735.498
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021248
(v1.0)
Tra2aFR069430,NM_198102101214
9.225144.5212368.8037181.55751.6526
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021248
(v1.0)
Tra2aNM_198102101214
7.458696.440483.66258
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021248
(v1.0)
Tra2aNM_198102101214
7.280423.323313.78249
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021248
(v1.0)
Tra2aFR069430,NM_198102101214
3.816334.79681
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021248
(v1.0)
Tra2aNM_198102101214
7.463026.352274.1485
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021248
(v1.0)
Tra2aNM_198102101214
47.5678134.681118.748
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021248
(v1.0)
Tra2aFR069430,NM_198102101214
189.679157.862
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021248
(v1.0)
Tra2aNM_198102101214
2.6660734.6838
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021248
(v1.0)
Tra2aNM_198102101214
5.989865.31717
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021248
(v1.0)
8810H3072D10-3Mm.203193AL022798101214
U027282NAP015821-001TC887093U,F,22.77572.75573.11643.27763.12443.1963.2887
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021248
(v1.0)
1454725_atMm.196598Tra2aNM_198102.2101214
106.075122.725637.81545.625956.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021248
(v1.0)
A_51_P513163G430041M01RikNM_198102101214
11P0.7670.229P
Proteome N/A