DBTMEE:0021262
| Gene | Trafd1 |
| Synonyms | Fln29 |
| Description | TRAF type zinc finger domain containing 1 |
| Locus | NM_172275 UCSC: chr5:121821734-121835624(-) OLP: chr5:121821734-121835624(-)
NM_001163470 UCSC: chr5:121821734-121835624(-) OLP: chr5:121821734-121835624(-)
|
| DB links |
Entrez 231712
MGI 1923551
Ensembl ENSMUSG00000042726
Vega OTTMUSG00000026315
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
negative regulation of innate immune response (GO:0045824)
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2021887 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0021262
(v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 67.4433 | 103.293 | 11.615 | 7.008 | 12.7228 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0021262
(v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 70.5181 | 18.3702 | 112.694 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0021262
(v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 68.8327 | 102.255 | 100.339 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0021262
(v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 70.5591 | 18.1186 | 110.048 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0021262
(v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 10.7537 | 6.76651 | 8.53299 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0021262
(v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 29.034 | 4.71854 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0021262
(v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 68.2162 | 57.5504 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0021262
(v1.0) | 12954 | H3155F08-3 | Mm.20488 | Fln29-pending | 231712
| U026680 | NAP005689-001 | | TC847592,TC847588,TC847587 | | U,F,2 | 4.3846 | 4.3682 | 3.6892 | 3.6181 | 3.5504 | 3.5455 | 3.4927 |
0021262
(v1.0) | 17256 | K0546G09-3 | Mm.20488 | Fln29-pending | 231712
| | | Fln29-pending | TC847586 | | | 2.5914 | 2.4906 | 2.7025 | 2.5848 | 2.8149 | 2.657 | 2.7108 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0021262
(v1.0) | 1428346_at | Mm.20488 | Trafd1 | NM_001163470.1,NM_172275.2 | 231712
| 155.575 | 398.725 | 0 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0021262
(v1.0) | A_51_P414412 | Trafd1 | NM_172275 | 231712
| 1 | 1 | P | 1.932 | 0.0957 | P |
0021262
(v1.0) | A_51_P486660 | Trafd1 | NM_172275 | 231712
| 1 | 1 | P | 1.063 | 0.656 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0021262
(v1.0) | Trafd1 | 231712
| 1 | 0 | 2 | 1 | 0 | 3 |
|
