DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021334
GeneTrim33
SynonymsEcto
ectodermin
Tif1g
Desc.tripartite motif-containing 33
LocusNM_053170 chr3:103083216-103162691(+)
NM_001079830 chr3:103083216-103162691(+)
DB links


Entrez 94093
MGI 2137357
Ensembl ENSMUSG00000033014
Featureprotein-coding
GO(BP)
  •   5 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      protein ubiquitination (GO:0016567)
      regulation of transforming growth factor beta receptor signaling pathway (GO:0017015)
      negative regulation of BMP signaling pathway (GO:0030514)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021961
(v2.0)
Trim33NM_001079830,NM_05317094093
4.464854.724847.3725937.858640.5959.628465.017446.1735737.88898.28506
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021334
(v1.0)
Trim3394093
Major ZGA0.99233
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021961
(v2.0)
Trim3394093
755/3710.5111464/3710.206157/3712.3231411/3711.472860/371-0.5629393/371-0.5146
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021961
(v2.0)
Trim3394093
447/1580.983249/1580.5372152/1583.4479382/1582.58594/158-2.961684/158-1.4941
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021961
(v2.0)
Trim3394093
40.661213829.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021961
(v2.0)
Trim3394093
11.688210710.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021334
(v1.0)
Trim33NM_001079830,NM_05317094093
4.912425.1070728.197828.1823.49344
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021334
(v1.0)
Trim33NM_001079830,NM_05317094093
5.136391.633225.57192
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021334
(v1.0)
Trim33NM_001079830,NM_05317094093
5.013625.055794.5644
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021334
(v1.0)
Trim33NM_001079830,NM_05317094093
5.139371.610855.00608
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021334
(v1.0)
Trim33NM_001079830,NM_05317094093
26.106727.210826.1093
SOLiD_NMNR_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021334
(v1.0)
Trim33NM_001079830,NM_05317094093
7.5728136.488
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021334
(v1.0)
Trim33NM_001079830,NM_05317094093
4.26515.31188
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021334
(v1.0)
18500L0210D08-3Mm.31048Trim3394093
U003664NAP005290-001Trim33;TC924228,TC924227Q99PP7U,F,23.58443.58313.45663.8313.32763.37053.2347
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021334
(v1.0)
1426954_atMm.195036Trim33NM_053170.2,NM_001079830.194093
678.7800.7751389.8751595.525799.525
0021334
(v1.0)
1455189_atMm.195036Trim33NM_053170.2,NM_001079830.194093
000348.475466.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021334
(v1.0)
A_51_P478279Trim33NM_05317094093
11P1.2960.234P
Proteome N/A