DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021399
GeneTrmt6
Synonyms
Desc.tRNA methyltransferase 6
LocusNM_175113 chr2:132629951-132641790(-)
DB links


Entrez 66926
MGI 1914176
Ensembl ENSMUSG00000037376
Vega OTTMUSG00000015648
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022027
(v2.0)
Trmt6NM_17511366926
9.107297.105179.6212244.476958.057323.899310.769610.188151.77228.6615
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021399
(v1.0)
Trmt666926
MGA0.96164
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022027
(v2.0)
Trmt666926
709/4750.0649424/475-0.279499/4751.3167279/4750.561221/475-2.3872122/475-2.5456
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022027
(v2.0)
Trmt666926
332/2030.196182/203-0.272387/2032.3114256/2031.65386/203-2.829568/203-2.1525
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022027
(v2.0)
Trmt666926
94.899517354.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022027
(v2.0)
Trmt666926
25.671410125.42
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
7.383356.6593533.120440.2447.64993
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
150.67160.384740.16838.199142.548
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
7.719973.330637.2655
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
7.535456.592487.54507
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
107.68171.063
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
7.724453.285018.27518
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
30.664338.857235.8896
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
162.073165.161
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021399
(v1.0)
Trmt6NM_17511366926
2.7608120.9585
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021399
(v1.0)
Trmt6NM_17511366926
9.879694.29276
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021399
(v1.0)
7163H3043E11-33300001M20Rik66926
U023397NAP005170-001TC888245,TC831677U,F,23.59383.59883.94883.80463.82873.80473.7525
0021399
(v1.0)
9971H3088G06-33300001M20Rik66926
U023397NAP005170-001TC888245,TC831677U,F,23.97043.82123.76454.08114.27594.16894.2584
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021399
(v1.0)
1438326_atMm.34199Trmt6NM_175113.366926
122.275124.55232.1369.625261.175
0021399
(v1.0)
1428754_atMm.34199Trmt6NM_175113.366926
001171.428242754.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021399
(v1.0)
A_52_P5258373300001M20RikNM_17511366926
11P1.2070.464P
0021399
(v1.0)
A_52_P6603853300001M20RikNM_17511366926
11P0.5150.122P
Proteome N/A