DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021528
GeneTtc1
SynonymsTPR1
Desc.tetratricopeptide repeat domain 1
LocusNM_133795 chr11:43543508-43561475(-)
DB links


Entrez 66827
MGI 1914077
Ensembl ENSMUSG00000041278
Vega OTTMUSG00000005463
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022159
(v2.0)
Ttc1NM_13379566827
19.6327152.535159.337201.434223.69633.055933.6401128.388186.03235.5593
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021528
(v1.0)
Ttc166827
2-Cell Transient0.96746
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022159
(v2.0)
Ttc166827
570/3960.0126372/396-0.205894/3961.498262/3960.731764/396-0.5643443/396-0.4363
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022159
(v2.0)
Ttc166827
219/155-0.0141162/155-0.052189/1552.7081237/1551.926711/155-1.671664/155-1.851
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022159
(v2.0)
Ttc166827
69.352612655.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022159
(v2.0)
Ttc166827
18.83427325.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
158.541110.121149.985155.03323.8312
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
210.514132.296197.109204.5632.1674
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
165.777.17988120.145
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
161.807109.01694.9198
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
128.915115.424
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
165.8667.08154104.105
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
138.863149.691128.477
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
189.247163.499
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021528
(v1.0)
Ttc1NM_13379566827
76.8815114.256
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021528
(v1.0)
Ttc1NM_13379566827
5.2792710.7201
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021528
(v1.0)
18170L0066F02-3Mm.602194833412C19Rik66827
U032681NAP096262-0014833412C19Rik;TC898697Q91Z38U,F,23.70843.74533.96563.99583.88883.89333.8338
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021528
(v1.0)
1448537_atMm.271974Ttc1NM_133795.166827
583.55259.7924.05602.2393.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021528
(v1.0)
A_52_P451041Ttc1NM_13379566827
11P0.650.204P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021528
(v1.0)
Ttc166827
102102