DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021657
GeneTxnl4a
SynonymsD18Wsu98e
ENSMUSG00000057130
Txnl4
U5-15kDa
Desc.thioredoxin-like 4A
LocusNM_025299 chr18:80403537-80422590(+)
NM_001038608 chr18:80403537-80409471(+)
NM_178604 chr18:80403585-80409471(+)
NM_001042408 chr18:80403606-80409471(+)
DB links


Entrez 27366
MGI 1351613
Ensembl ENSMUSG00000057130
Vega OTTMUSG00000033180
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022291
(v2.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
42.415727.670430.6437129.446132.497106.57787.246737.3333128.393117.197
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021657
(v1.0)
Txnl4a27366
Major ZGA0.9978
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022291
(v2.0)
Txnl4a27366
650/4360.0632409/436-0.2079137/4361.9018284/4360.709624/436-2.0803207/436-1.6668
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022291
(v2.0)
Txnl4a27366
299/1440.5381185/1440.2437126/1443.3031266/1442.19719/144-1.831350/144-2.0923
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022291
(v2.0)
Txnl4a27366
83.409416550.55
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022291
(v2.0)
Txnl4a27366
14.4759115.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
28.759221.260396.355791.906962.4491
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
369.272111.931446.8181009.28289.284
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
30.070415.511823.1954
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
29.351621.046827.749
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
60.9476134.191
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
30.087815.299430.4342
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
89.210488.739888.7308
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
998.316868.598
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
6.2311433.6344
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021657
(v1.0)
Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
3.563460.223431
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021657
(v1.0)
15368K0131E01-3Mm.45433Dim1-pending27366
U018942NAP006301-001D18Wsu98e;TC926322Q9CQX6U,F,22.65222.77582.76892.91492.78212.81252.667
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021657
(v1.0)
1433698_a_atMm.172411Txnl4aNM_025299.3,NM_178604.3,NM_001038608.2,NM_001042408.127366
155.6750370380.4548.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021657
(v1.0)
A_51_P360836D18Wsu98eNM_17860427366
11P0.7460.213P
0021657
(v1.0)
A_52_P179729Txnl4NM_02529927366
11P0.4040.113P
Proteome N/A