DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021659
GeneTxnrd1
SynonymsTR
TR alpha
TR1
TrxR1
Desc.thioredoxin reductase 1
LocusNM_001042523 chr10:82296696-82360469(+)
NM_015762 chr10:82321951-82360469(+)
NM_001042513 chr10:82321951-82360469(+)
NM_001042514 chr10:82323086-82360469(+)
DB links


Entrez 50493
MGI 1354175
Ensembl ENSMUSG00000020250
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022293
(v2.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
46.831244.050437.858319.176715.724765.265639.503629.525517.544684.3239
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021659
(v1.0)
Txnrd150493
Maternal RNA0.99053
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022293
(v2.0)
Txnrd150493
655/485-0.0791432/485-0.2825149/4851.8724524/4851.4382142/4850.2835774/4850.0748
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022293
(v2.0)
Txnrd150493
322/2000.1734198/200-0.13138/2002.9912495/2002.623699/2001.0281492/2000.6965
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022293
(v2.0)
Txnrd150493
106.562611295.15
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022293
(v2.0)
Txnrd150493
48.0135096.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021659
(v1.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
45.785526.210414.264910.928928.205
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021659
(v1.0)
Txnrd1FR203592,FR215940,NM_001042513,NM_001042514,NM_001042523,NM_01576250493
181.468133.798165.771125.88225.614
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021659
(v1.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
47.87317.126628.5961
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021659
(v1.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
46.728725.947221.9066
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021659
(v1.0)
Txnrd1FR203592,FR215940,NM_001042513,NM_001042514,NM_001042523,NM_01576250493
207.294184.574
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021659
(v1.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
47.900816.89224.0265
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021659
(v1.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
13.207110.552312.1272
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021659
(v1.0)
Txnrd1FR203592,FR215940,NM_001042513,NM_001042514,NM_001042523,NM_01576250493
163.186129.756
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021659
(v1.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
28.51973.87642
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021659
(v1.0)
Txnrd1NM_001042513,NM_001042514,NM_001042523,NM_01576250493
3.941959.40479
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021659
(v1.0)
275C0031E03-3Mm.44552Txnrd150493
U011805NAP097951-001Txnrd1;TC899638,TC899637,TC885266,TC885265Q99P494.0033.75953.86934.06963.45093.95914.0445
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021659
(v1.0)
1421529_a_atMm.210155Txnrd1NM_001042523.1,NM_001042514.1,NM_001042513.1,NM_015762.250493
157.275144.4557.02581.625243.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021659
(v1.0)
A_51_P320614Txnrd1NM_01576250493
11P1.4360.171P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021659
(v1.0)
Txnrd150493
152422447572