DBTMEE:0021743
| Gene | Ubfd1 |
| Synonyms | D7Wsu105e
D7Wsu128e |
| Description | ubiquitin family domain containing 1 |
| Locus | NM_138589 UCSC: chr7:129210712-129225713(+) OLP: chr7:129210712-129225713(+)
|
| DB links |
Entrez 28018
MGI 107301
Ensembl ENSMUSG00000030870
Vega OTTMUSG00000025468
|
| Feature | protein-coding |
| GO_BP | |
| GO_MF | |
| GO_CC | |
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2022379 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0021743
(v1.0) | Ubfd1 | NM_138589 | 28018
| 60.1282 | 66.7907 | 52.4861 | 37.4522 | 12.816 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0021743
(v1.0) | Ubfd1 | NM_138589 | 28018
| 62.8695 | 5.61111 | 72.8701 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0021743
(v1.0) | Ubfd1 | NM_138589 | 28018
| 61.3669 | 66.12 | 70.3737 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0021743
(v1.0) | Ubfd1 | NM_138589 | 28018
| 62.9061 | 5.53426 | 77.1835 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0021743
(v1.0) | Ubfd1 | NM_138589 | 28018
| 48.594 | 36.1616 | 28.598 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0021743
(v1.0) | Ubfd1 | NM_138589 | 28018
| 68.8256 | 18.9225 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0021743
(v1.0) | Ubfd1 | NM_138589 | 28018
| 35.4915 | 44.4336 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0021743
(v1.0) | 7106 | H3042C01-3 | Mm.21103 | D7Wsu128e | 28018
| U042862 | NAP097291-001 | D7Wsu128e; | TC899487,TC899485,TC899484,TC865656 | Q9CYA9 | U,F,2 | 3.4819 | 3.4196 | 3.561 | 3.9185 | 3.238 | 3.5199 | 3.2232 |
0021743
(v1.0) | 11539 | H3117H09-5 | | D7Wsu128e | 28018
| U042862 | NAP075167-1 | D7Wsu128e; | TC899485,TC899484 | Q9CYA9 | U,F,2 | 3.1442 | 3.0159 | 3.1806 | 3.3895 | 3.0548 | 3.1311 | 3.0184 |
0021743
(v1.0) | 17896 | L0030E02-3 | Mm.21103 | D7Wsu128e | 28018
| U042862 | NAP018415-001 | D7Wsu128e; | TC864635 | Q9CYA9 | U,F,2 | 3.3737 | 3.2329 | 3.0174 | 2.8145 | 2.9092 | 2.8824 | 2.8471 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0021743
(v1.0) | 1448968_at | Mm.282122 | Ubfd1 | NM_138589.2 | 28018
| 292.425 | 518.875 | 887.625 | 894.525 | 474.2 |
0021743
(v1.0) | 1434078_at | Mm.282122 | Ubfd1 | NM_138589.2 | 28018
| 282.475 | 550.025 | 250.675 | 151.65 | 201.625 |
0021743
(v1.0) | 1456217_at | Mm.282122 | Ubfd1 | NM_138589.2 | 28018
| 128.55 | 148.3 | 1112.7 | 274.5 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0021743
(v1.0) | A_51_P496604 | D7Wsu128e | NM_138589 | 28018
| 1 | 1 | P | 1.704 | 0.144 | P |
0021743
(v1.0) | A_52_P191468 | D7Wsu128e | NM_138589 | 28018
| 1 | 1 | P | 0.935 | 0.625 | P |
0021743
(v1.0) | A_52_P88934 | D7Wsu128e | AK033428 | 28018
| 1 | 1 | P | 0.699 | 0.178 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0021743
(v1.0) | Ubfd1 | 28018
| 2 | 3 | 3 | 3 | 5 | 8 |
|
