DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021831
GeneUimc1
SynonymsRxrip110
Desc.ubiquitin interaction motif containing 1
LocusNM_011307 chr13:55129241-55201656(-)
DB links


Entrez 20184
MGI 103185
Ensembl ENSMUSG00000025878
Vega OTTMUSG00000032667
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022469
(v2.0)
Uimc1NM_001293660,NM_011307,NR_12159220184
7.870986.75655.346948.319528.382638.083317.509146.625049.868048.03015
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021831
(v1.0)
Uimc120184
Major ZGA0.9786
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022469
(v2.0)
Uimc120184
490/3150.1242327/315-0.0621130/3152.2808314/3151.319815/315-2.260490/315-2.3872
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022469
(v2.0)
Uimc120184
247/1330.3778133/133-0.115393/1332.9744223/1332.05635/133-2.45735/133-2.475
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022469
(v2.0)
Uimc120184
38.065710934.92
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022469
(v2.0)
Uimc120184
13.23155822.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
7.015013.718186.12685.714185.21632
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
10.08865.043429.277497.942918.41822
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
7.334832.700484.05661
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
7.159523.680844.83708
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
4.020785.52583
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
7.339092.66355.30515
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
5.672475.517276.74889
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
8.4492311.6039
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021831
(v1.0)
Uimc1NM_01130720184
16.57232.86406
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021831
(v1.0)
Uimc1NM_01130720184
0.230230.653357
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021831
(v1.0)
14395J0460A06-3Mm.4097Rxrip11020184
Rxrip110TC8206692.6382.90932.86053.26052.80163.14432.9536
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021831
(v1.0)
1426829_atMm.259301Uimc1NM_011307.220184
487.40275.80273.1
Agilent44K N/A
Proteome N/A