DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021909
GeneUsp16
SynonymsUsp21
ESTM28
Usp23
W53272
Desc.ubiquitin specific peptidase 21
LocusNM_024258 chr16:87455230-87483758(+)
DB links


Entrez 74112
MGI 1921362
Ensembl ENSMUSG00000025616
Vega OTTMUSG00000026485
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022552
(v2.0)
Usp16NM_02425874112
15.384436.065263.6964139.695137.5318.9266811.630455.5182108.6168.70689
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021909
(v1.0)
Usp1674112
Major ZGA0.9767
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022552
(v2.0)
Usp1674112
581/3670.1496399/3670.0044201/3672.6927536/3671.870642/367-1.0519462/367-0.2664
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022552
(v2.0)
Usp1674112
332/2020.2031207/202-0.0805194/2023.466520/2022.680413/202-1.8225143/202-1.0896
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022552
(v2.0)
Usp1674112
40.189311534.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022552
(v2.0)
Usp1674112
12.38818414.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021909
(v1.0)
Usp16NM_02425874112
37.477244.092104.02195.20538.16779
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021909
(v1.0)
Usp16NM_02425874112
47.037752.4502177.17181.47325.0368
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021909
(v1.0)
Usp16NM_02425874112
39.18585.6262548.1054
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021909
(v1.0)
Usp16NM_02425874112
38.249343.649341.1306
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021909
(v1.0)
Usp16NM_02425874112
552.479460.261
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021909
(v1.0)
Usp16NM_02425874112
39.20865.5491945.1107
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021909
(v1.0)
Usp16NM_02425874112
96.307391.924574.9993
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021909
(v1.0)
Usp16NM_02425874112
238.283165.773
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021909
(v1.0)
Usp16NM_02425874112
45.3227103.296
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021909
(v1.0)
Usp16NM_02425874112
14.02920.3833
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021909
(v1.0)
7675H3052C10-3Mm.77476330514E22Rik76164
U017333NAP056196-1Usp16;TC935636Q99KM0U,F,22.9742.89843.10593.21123.17392.98592.9987
0021909
(v1.0)
12781H3152C04-3Mm.196253Usp1674112
U017333NAP121661-001Usp16;TC935635,TC935633Q99KM0U,F,23.47313.75514.20264.32583.70953.90343.5806
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021909
(v1.0)
1431951_a_atMm.152941Usp16NM_024258.274112
592.225361.351497.9751.375230.875
0021909
(v1.0)
1430203_atMm.152941Usp16NM_024258.274112
00881.075425.7250
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021909
(v1.0)
A_51_P513424Usp16NM_02425874112
11P0.9810.882P
Proteome N/A