DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021922
GeneUsp29
SynonymsOcat
Desc.ubiquitin specific peptidase 29
LocusNM_021323 chr7:6683452-6919931(+)
DB links


Entrez 57775
MGI 1888998
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022569
(v2.0)
Usp29NM_001290994,NM_02132357775
04.966326.7338926.6135.706410.4901790.02046275.312783.702460.311948
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021922
(v1.0)
Usp2957775
2-Cell Transient0.97293
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022569
(v2.0)
Usp2957775
767/4480.2624507/4480.0622114/4481.6006530/4481.5684195/4480.85181191/4480.8099
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022569
(v2.0)
Usp2957775
365/2010.3464234/2010.102677/2012.1508368/2012.1898127/2011.3772790/2011.3709
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022569
(v2.0)
Usp2957775
41.987515926.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022569
(v2.0)
Usp2957775
15.345610215.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021922
(v1.0)
Usp29NM_02132357775
5.275184.7632220.23684.032520.0134623
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021922
(v1.0)
Usp29FR360348,NM_02132357775
14.22311.534450.761810.26870.0429363
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021922
(v1.0)
Usp29NM_02132357775
5.5156805.19678
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021922
(v1.0)
Usp29NM_02132357775
5.383854.715394.02288
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021922
(v1.0)
Usp29FR360348,NM_02132357775
5.247534.51466
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021922
(v1.0)
Usp29NM_02132357775
5.5188904.41216
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021922
(v1.0)
Usp29NM_02132357775
18.73613.893562.62142
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021922
(v1.0)
Usp29FR360348,NM_02132357775
4.5733.16381
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021922
(v1.0)
Usp29NM_02132357775
6.3541436.0853
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021922
(v1.0)
Usp29NM_02132357775
2.913032.61135
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021922
(v1.0)
A_51_P257982Usp29NM_02132357775
11P0.4240.0873P
Proteome N/A