DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022721
GeneYthdf1
Synonyms
Desc.YTH domain family 1
LocusNM_173761 chr2:180639082-180655641(-)
DB links


Entrez 228994
MGI 1917431
Ensembl ENSMUSG00000038848
Vega OTTMUSG00000016403
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023373
(v2.0)
Ythdf1NM_173761228994
17.16969.7843412.60253.644636.768227.986415.870211.054930.702131.4114
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022721
(v1.0)
Ythdf1228994
2-Cell Transient0.96907
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023373
(v2.0)
Ythdf1228994
657/492-0.0954433/492-0.2998128/4921.6346262/4920.420350/492-1.2245400/492-0.8955
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023373
(v2.0)
Ythdf1228994
313/1630.4262168/163-0.0722119/1633.0556234/1631.83716/163-1.239985/163-1.522
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023373
(v2.0)
Ythdf1228994
38.6510437.16
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023373
(v2.0)
Ythdf1228994
13.36137717.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022721
(v1.0)
Ythdf1NM_173761228994
10.178.7084439.931325.493911.2809
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022721
(v1.0)
Ythdf1FR347465,NM_173761228994
12.22719.4003670.206839.219431.2551
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022721
(v1.0)
Ythdf1NM_173761228994
10.63376.27919.5011
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022721
(v1.0)
Ythdf1NM_173761228994
10.37958.6218.17323
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022721
(v1.0)
Ythdf1FR347465,NM_173761228994
9.546389.17094
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022721
(v1.0)
Ythdf1NM_173761228994
10.63986.193098.96412
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022721
(v1.0)
Ythdf1NM_173761228994
36.970224.615321.2162
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022721
(v1.0)
Ythdf1FR347465,NM_173761228994
29.186224.9195
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022721
(v1.0)
Ythdf1NM_173761228994
10.590924.2107
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022721
(v1.0)
Ythdf1NM_173761228994
2.962631.12828
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022721
(v1.0)
528C0115C10-3Mm.302058030473O16228994
U023770NAP002834-001TC919373U,F,23.19493.223.04093.28683.27483.38383.4203
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022721
(v1.0)
1415767_atMm.30205Ythdf1NM_173761.3228994
66.52598.25144.575146.725116.1
0022721
(v1.0)
1437456_x_atMm.30205Ythdf1NM_173761.3228994
247.375156.425516.8557.9683
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022721
(v1.0)
A_51_P488799Ythdf1NM_173761228994
11P0.3780.124P
Proteome N/A