DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0022986

Gene

Zfp410

Synonyms

D12Ertd748e

Description

zinc finger protein 410

Locus

NR_045546 UCSC: chr12:85657809-85684780(+) OLP: chr12:85657809-85684780(+)
NM_001252582 UCSC: chr12:85657809-85675069(+) OLP: chr12:85657809-85675069(+)
NM_144833 UCSC: chr12:85657809-85684780(+) OLP: chr12:85657809-85684780(+)
NM_001252583 UCSC: chr12:85657809-85676817(+) OLP: chr12:85657809-85676817(+)
NR_045615 UCSC: chr12:85657809-85685389(+) OLP: chr12:85657809-85685389(+)

DB links

Entrez 52708
MGI 1289280
Ensembl ENSMUSG00000042472

Feature

protein-coding

GO_BP

2 Terms

GO_MF

4 Terms

GO_CC

2 Terms

KEGG

see DBTMEE:2023641 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0022986 (v1.0)	Zfp410	NM_144833	52708	7.81041	9.23396	39.2903	28.2077	7.50993

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0022986 (v1.0)	Zfp410	NM_144833	52708	8.1665	2.1533	10.0745

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0022986 (v1.0)	Zfp410	NM_144833	52708	7.97132	9.14124	8.40532

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0022986 (v1.0)	Zfp410	NM_144833	52708	8.17125	2.12381	9.21867

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0022986 (v1.0)	Zfp410	NM_144833	52708	36.3767	27.2357	20.8293

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0022986 (v1.0)	Zfp410	NM_144833	52708	3.52959	17.8323

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0022986 (v1.0)	Zfp410	NM_144833	52708	5.33985	4.79612

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0022986 (v1.0)	17713	L0008E08-3	Mm.22359	D12Ertd748e	52708	U014189	NAP094053-001	D12Ertd748e;	TC893241		U,F,2	3.9344	4.1978	4.5807	4.3322	3.8809	4.1911	3.9076
0022986 (v1.0)	19445	L0273H07-3	Mm.22359	D12Ertd748e	52708	U014189	NAP001926-002	D12Ertd748e;	TC915711		U,F,2	2.829	2.6111	2.8815	2.7609	2.6821	2.7208	2.7204

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0022986 (v1.0)	1451150_at	Mm.255150	Zfp410	NM_144833.2	52708	47.775	0	166.225	0	50.575

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0022986 (v1.0)	A_51_P369897	Zfp410	NM_144833	52708	1	1	P	1.013	0.92	P

N/A