DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002777
GeneArntl
SynonymsArnt3
bHLHe5
Bmal1
MOP3
Descriptionaryl hydrocarbon receptor nuclear translocator-like
LocusNM_007489 UCSC: chr7:120350979-120457640(+) OLP: chr7:120350979-120457640(+)
NM_001243048 UCSC: chr7:120350979-120457640(+) OLP: chr7:120350979-120457640(+)
DB links


Entrez 11865
MGI 1096381
Ensembl ENSMUSG00000055116
Featureprotein-coding
GO_BP
  •   28 Terms
      protein import into nucleus, translocation (GO:0000060)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      signal transduction (GO:0007165)
      spermatogenesis (GO:0007283)
      circadian rhythm (GO:0007623)
      negative regulation of TOR signaling (GO:0032007)
      circadian regulation of gene expression (GO:0032922)
      regulation of protein catabolic process (GO:0042176)
      regulation of hair cycle (GO:0042634)
      positive regulation of circadian rhythm (GO:0042753)
      proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161)
      negative regulation of fat cell differentiation (GO:0045599)
      negative regulation of transcription, DNA-templated (GO:0045892)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      rhythmic process (GO:0048511)
      regulation of neurogenesis (GO:0050767)
      regulation of insulin secretion (GO:0050796)
      regulation of cell cycle (GO:0051726)
      response to redox state (GO:0051775)
      positive regulation of canonical Wnt signaling pathway (GO:0090263)
      oxidative stress-induced premature senescence (GO:0090403)
      regulation of type B pancreatic cell development (GO:2000074)
      negative regulation of glucocorticoid receptor signaling pathway (GO:2000323)
      regulation of cellular senescence (GO:2000772)
      positive regulation of skeletal muscle cell differentiation (GO:2001016)
GO_MF
  •   17 Terms
      transcription regulatory region sequence-specific DNA binding (GO:0000976)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity (GO:0000982)
      core promoter binding (GO:0001047)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription (GO:0001190)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      signal transducer activity (GO:0004871)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      aryl hydrocarbon receptor binding (GO:0017162)
      bHLH transcription factor binding (GO:0043425)
      sequence-specific DNA binding (GO:0043565)
      protein heterodimerization activity (GO:0046982)
      protein dimerization activity (GO:0046983)
      Hsp90 protein binding (GO:0051879)
      E-box binding (GO:0070888)
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002777
(v2.0)		ArntlNM_001243048,NM_00748911865
1.9011361.0521139.24623.97715.971433.950684.02355119.8889.209524.128
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002777
(v2.0)		Arntl11865
744/4600.1805461/460-0.1128125/4601.6953321/4600.8088197/4600.82871082/4600.6335
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002777
(v2.0)		Arntl11865
372/1580.719196/1580.1936106/1582.932244/1581.941353/1580.4714280/1580.2248
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002777
(v2.0)		Arntl11865
59.612615937.49
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002777
(v2.0)		Arntl11865
10.11511059.63
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002881
(v1.0)		10938H3105G09-3Mm.12177Arntl11865
U008650NAP007301-001Arntl;TC871038,TC843036,TC843035,TC843032O88295U,F,24.02334.093.17882.94322.2362.40872.4576
MOE430 N/A
Agilent44K N/A
Proteome N/A