DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003468
GeneBrap
Synonyms
DescriptionBRCA1 associated protein
LocusNM_028227 UCSC: chr5:122110572-122137258(+) OLP: chr5:122110572-122137258(+)
NM_001289543 UCSC: chr5:122110572-122137258(+) OLP: chr5:122110572-122137258(+)
NM_001289544 UCSC: chr5:122110878-122137258(+) OLP: chr5:122110878-122137258(+)
DB links


Entrez 72399
MGI 1919649
Ensembl ENSMUSG00000029458
Vega OTTMUSG00000023519
Featureprotein-coding
GO_BP
GO_MF
  •   16 Terms
      nucleotide binding (GO:0000166)
      ubiquitin-protein transferase activity (GO:0004842)
      nuclear localization sequence binding (GO:0008139)
      zinc ion binding (GO:0008270)
      UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (GO:0008766)
      ligase activity (GO:0016874)
      ribosomal S6-glutamic acid ligase activity (GO:0018169)
      coenzyme F420-0 gamma-glutamyl ligase activity (GO:0043773)
      coenzyme F420-2 alpha-glutamyl ligase activity (GO:0043774)
      metal ion binding (GO:0046872)
      protein-glycine ligase activity (GO:0070735)
      protein-glycine ligase activity, initiating (GO:0070736)
      protein-glycine ligase activity, elongating (GO:0070737)
      tubulin-glycine ligase activity (GO:0070738)
      protein-glutamic acid ligase activity (GO:0070739)
      tubulin-glutamic acid ligase activity (GO:0070740)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003468
(v2.0)		BrapNM_001289543,NM_001289544,NM_02822772399
28.315981.7171120.22186.025850.37645.5603823.2465144.25752.71245.15095
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003468
(v2.0)		Brap72399
592/3970.0635389/397-0.1452177/3972.4004396/3971.322213/397-2.7829152/397-1.9737
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003468
(v2.0)		Brap72399
343/2110.1873227/211-0.0107173/2113.2422379/2112.162910/211-2.232192/211-1.7801
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003468
(v2.0)		Brap72399
74.942213157.21
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003468
(v2.0)		Brap72399
25.54557932.34
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003587
(v1.0)		22160L0944H05-3Mm.153372Brap72399
U006125NAP006030-001Brap;TC898501,TC898496Q9CXX8U,F,24.19914.22593.76953.79693.29423.50093.3094
MOE430 N/A
Agilent44K N/A
Proteome N/A