DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004631
GeneChsy1
Synonyms
Descriptionchondroitin sulfate synthase 1
LocusNM_001081163 UCSC: chr7:73254401-73318684(+) OLP: chr7:73254401-73318684(+)
DB links


Entrez 269941
MGI 2681120
Ensembl ENSMUSG00000032640
Vega OTTMUSG00000029829
Featureprotein-coding
GO_BP
  •   2 Terms
      chondroitin sulfate biosynthetic process (GO:0030206)
      negative regulation of ossification (GO:0030279)
GO_MF
  •   5 Terms
      transferase activity (GO:0016740)
      transferase activity, transferring hexosyl groups (GO:0016758)
      metal ion binding (GO:0046872)
      glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (GO:0047238)
      N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (GO:0050510)
GO_CC
KEGG
  •   2 Terms
      Glycosaminoglycan biosynthesis - chondroitin sulfate (mmu00532)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004631
(v2.0)		Chsy1NM_001081163269941
3.18789146.242154.23934.2737.819125.2724911.8676192.75213.87655.44651
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004631
(v2.0)		Chsy1269941
689/4580.0762391/458-0.3435167/4582.1165385/4581.0766110/458-0.0001779/4580.1666
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004631
(v2.0)		Chsy1269941
368/1600.6854181/1600.0613154/1603.4498349/1602.438132/160-0.2568301/1600.3106
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004631
(v2.0)		Chsy1269941
70.249617340.61
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004631
(v2.0)		Chsy1269941
18.7911915.79
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A