DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004980
GeneCopa
Synonymsxenin
Descriptioncoatomer protein complex subunit alpha
LocusNM_009938 UCSC: chr1:174012660-174052463(+) OLP: chr1:174012660-174052463(+)
DB links


Entrez 12847
MGI 1334462
Ensembl ENSMUSG00000026553
Vega OTTMUSG00000033968
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   1 Terms
      Neuroactive ligand-receptor interaction (mmu04080)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004980
(v2.0)		CopaNM_00993812847
77.53489.8951824.39637.921658.0342641.620742.334935.809611.36336.9456
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004980
(v2.0)		Copa12847
559/3790.0477417/3790.0216209/3792.7038398/3791.395911/379-2.939174/379-2.9305
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004980
(v2.0)		Copa12847
234/1420.2064176/1420.1922201/1423.9912382/1422.73747/142-2.133724/142-3.0859
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004980
(v2.0)		Copa12847
70.822512855.33
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004980
(v2.0)		Copa12847
23.41627929.64
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005049
(v1.0)		18365L0204A02-3Mm.30041Copa12847
U001100NAP092606-001TC806564,TC798902Q99JW9U,F4.20984.35644.68354.45634.28184.43674.3042
MOE430 N/A
Agilent44K N/A
Proteome N/A