DBTMEE:2006116
| Gene | Dnmt1 |
| Synonyms | Cxxc9
Dnmt1o
MommeD2
MTase |
| Description | DNA methyltransferase (cytosine-5) 1 |
| Locus | NM_010066 UCSC: chr9:20711650-20757423(-) OLP: chr9:20711650-20757423(-)
NM_001199431 UCSC: chr9:20711650-20757423(-) OLP: chr9:20711650-20757423(-)
NM_001199433 UCSC: chr9:20711650-20757067(-) OLP: chr9:20711650-20757067(-)
NM_001199432 UCSC: chr9:20711650-20764332(-) OLP: chr9:20711650-20764332(-)
|
| DB links |
Entrez 13433
MGI 94912
Ensembl ENSMUSG00000004099
|
| Feature | protein-coding |
| GO_BP |
-
 21 Terms
|
| GO_MF |
-
18 Terms
|
| GO_CC |
-
6 Terms
|
| KEGG |
-
2 Terms
|
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2006116
(v2.0) | Dnmt1 | NM_001199431,NM_001199432,NM_001199433,NM_010066 | 13433
| 17.0299 | 196.056 | 58.3222 | 34.9535 | 28.5 | 40.0346 | 26.7449 | 71.1012 | 30.2183 | 29.7743 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2006116
(v2.0) | Dnmt1 | 13433
| 682/492 | -0.0416 | 402/492 | -0.4067 | 80/492 | 0.9633 | 228/492 | 0.2206 | 54/492 | -1.1155 | 480/492 | -0.6334 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2006116
(v2.0) | Dnmt1 | 13433
| 319/182 | 0.2953 | 168/182 | -0.2303 | 76/182 | 2.2669 | 200/182 | 1.4547 | 9/182 | -2.1607 | 104/182 | -1.3937 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2006116
(v2.0) | Dnmt1 | 13433
| 70.5583 | 139 | 50.76 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2006116
(v2.0) | Dnmt1 | 13433
| 18.4252 | 84 | 21.93 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0006187
(v1.0) | 4902 | G0112B12-3 | Mm.7814 | Dnmt1 | 13433
| U030563 | NAP121152-001 | Dnmt1; | TC853311,TC853310 | P13864 | U,F,2 | 3.6798 | 3.7102 | 3.2504 | 3.4166 | 3.1891 | 3.2356 | 3.3523 |
0006187
(v1.0) | 15678 | K0224A09-3 | Mm.7814 | Dnmt1 | 13433
| U030563 | NAP056232-1 | Dnmt1; | | P13864 | U,F,2 | 3.2947 | 3.164 | 3.0174 | 3.1423 | 3.19 | 3.1446 | 3.1322 |
0006187
(v1.0) | 17956 | L0037B04-3 | Mm.7814 | Dnmt1 | 13433
| U030563 | NAP121152-001 | Dnmt1; | TC853311,TC853310 | P13864 | U,F,2 | 3.7971 | 3.7616 | 3.2966 | 3.5504 | 3.4171 | 3.44 | 3.4189 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
