DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2006501
GeneEgln1
SynonymsHif-p4h-2
ORF13
Phd2
SM-20
Descriptionegl-9 family hypoxia-inducible factor 1
LocusNM_053207 UCSC: chr8:127432487-127473154(-) OLP: chr8:127432487-127473154(-)
DB links


Entrez 112405
MGI 1932286
Ensembl ENSMUSG00000031987
Featureprotein-coding
GO_BP
  •   13 Terms
      response to hypoxia (GO:0001666)
      peptidyl-proline hydroxylation to 4-hydroxy-L-proline (GO:0018401)
      negative regulation of cAMP catabolic process (GO:0030821)
      oxygen homeostasis (GO:0032364)
      negative regulation of sequence-specific DNA binding transcription factor activity (GO:0043433)
      regulation of angiogenesis (GO:0045765)
      negative regulation of cyclic-nucleotide phosphodiesterase activity (GO:0051344)
      cardiac muscle tissue morphogenesis (GO:0055008)
      oxidation-reduction process (GO:0055114)
      heart trabecula formation (GO:0060347)
      ventricular septum morphogenesis (GO:0060412)
      labyrinthine layer development (GO:0060711)
      response to nitric oxide (GO:0071731)
GO_MF
  •   10 Terms
      iron ion binding (GO:0005506)
      oxidoreductase activity (GO:0016491)
      oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
      oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
      enzyme binding (GO:0019899)
      L-ascorbic acid binding (GO:0031418)
      peptidyl-proline dioxygenase activity (GO:0031543)
      peptidyl-proline 4-dioxygenase activity (GO:0031545)
      metal ion binding (GO:0046872)
      dioxygenase activity (GO:0051213)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006501
(v2.0)		Egln1NM_053207112405
17.356867.902848.117235.19422.315514.339518.240450.422824.107314.6209
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006501
(v2.0)		Egln1112405
742/4180.3144432/418-0.0685106/4181.5939305/4180.8727109/4180.1175624/418-0.0213
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006501
(v2.0)		Egln1112405
377/1880.4888196/188-0.055894/1882.5261282/1881.902264/1880.494384/1880.429
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006501
(v2.0)		Egln1112405
98.781418553.4
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006501
(v2.0)		Egln1112405
13.89839514.63
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006570
(v1.0)		7010H3040D02-3Mm.140619Egln1112405
U030400NAP097794-001Egln1;TC869111Q91YE3U,F,23.33373.32993.1523.19123.01643.32133.4403
0006570
(v1.0)		19218L0257H07-3Mm.140619Egln1112405
U030400NAP097794-001Egln1;TC869111Q91YE3U,F,23.99453.97493.55723.40083.66883.70843.9441
MOE430 N/A
Agilent44K N/A
Proteome N/A