DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010011
GeneHmg20a
SynonymsHmgxb1
Descriptionhigh mobility group 20A
LocusNM_025812 UCSC: chr9:56266653-56344743(+) OLP: chr9:56266653-56344743(+)
DB links


Entrez 66867
MGI 1914117
Ensembl ENSMUSG00000032329
Featureprotein-coding
GO_BP
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      chromatin modification (GO:0016568)
      negative regulation of neuron differentiation (GO:0045665)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010011
(v2.0)		Hmg20aNM_02581266867
9.9487349.400768.62918.994835.636629.1890512.472569.4317.837428.19538
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010011
(v2.0)		Hmg20a66867
661/4060.1899445/4060.0161168/4062.2941421/4061.378130/406-1.6681156/406-1.9689
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010011
(v2.0)		Hmg20a66867
330/1670.4674172/167-0.0732161/1673.456365/1672.44174/167-3.039548/167-2.3619
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010011
(v2.0)		Hmg20a66867
50.513415333.02
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010011
(v2.0)		Hmg20a66867
8.60171087.96
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010128
(v1.0)		11468H3116A12-3Mm.150856Hmg20a66867
U010525NAP095190-001Hmg20a;TC941649Q9CYG2U,F3.44533.40413.68623.44753.25763.41343.2509
MOE430 N/A
Agilent44K N/A
Proteome N/A