DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010027
GeneHmgn1
SynonymsHMG-14
Hmg14
Descriptionhigh mobility group nucleosomal binding domain 1
LocusNM_008251 UCSC: chr16:96343195-96349332(-) OLP: chr16:96343195-96349332(-)
DB links


Entrez 15312
MGI 96120
Featureprotein-coding
GO_BP
  •   9 Terms
      pyrimidine dimer repair by nucleotide-excision repair (GO:0000720)
      transcription-coupled nucleotide-excision repair (GO:0006283)
      chromatin organization (GO:0006325)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      response to UV-B (GO:0010224)
      response to UV-C (GO:0010225)
      regulation of development, heterochronic (GO:0040034)
      post-embryonic camera-type eye morphogenesis (GO:0048597)
      regulation of epithelial cell proliferation (GO:0050678)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010027
(v2.0)		Hmgn1NM_00825115312
141.596295.46440.147151.385205.705493.218213.208464230.052623.648
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010027
(v2.0)		Hmgn115312
705/4930.0032451/493-0.2441202/4932.2859664/4931.755774/493-0.671534/493-0.4829
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010027
(v2.0)		Hmgn115312
341/2010.2486180/201-0.2739185/2013.4046585/2012.85720/201-1.230595/201-1.6649
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010027
(v2.0)		Hmgn115312
66.916112951.87
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010027
(v2.0)		Hmgn115312
17.15877722.28
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010144
(v1.0)		18027L0045B11-3Mm.2756Hmgn115312
U037343NAP096811-001Hmgn1;TC918810,TC918805P18608U,F,23.273.223.24263.37063.6583.44723.5899
MOE430 N/A
Agilent44K N/A
Proteome N/A