DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016499
GenePdlim1
SynonymsmClim1
DescriptionPDZ and LIM domain 1 (elfin)
LocusNM_016861 UCSC: chr19:40296729-40346106(-) OLP: chr19:40296729-40346106(-)
DB links


Entrez 54132
MGI 1860611
Featureprotein-coding
GO_BP
  •   1 Terms
      regulation of transcription, DNA-templated (GO:0006355)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016499
(v2.0)		Pdlim1NM_01686154132
70.529929.334469.07228.0251414.694862.327412.210299.952715.091874.9411
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016499
(v2.0)		Pdlim154132
716/4750.0791485/475-0.086124/4751.6387576/4751.6043384/4751.74211592/4751.1438
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016499
(v2.0)		Pdlim154132
391/2190.3221262/2190.1418104/2192.4627451/2192.3602215/2192.0107958/2191.5255
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016499
(v2.0)		Pdlim154132
45.358216228
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016499
(v2.0)		Pdlim154132
9.65059410.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016026
(v1.0)		6063H3015E11-3Mm.5567Pdlim154132
U039018NAP096235-001Pdlim1;elfin;TC858332O70400U,F,23.06483.00422.35842.4942.54252.58412.5374
MOE430 N/A
Agilent44K N/A
Proteome N/A