DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018187
GeneRest
SynonymsNRSF
DescriptionRE1-silencing transcription factor
LocusNM_011263 UCSC: chr5:77694519-77712722(+) OLP: chr5:77694519-77712722(+)
DB links


Entrez 19712
MGI 104897
Ensembl ENSMUSG00000029249
Vega OTTMUSG00000021414
Featureprotein-coding
GO_BP
  •   29 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      hematopoietic progenitor cell differentiation (GO:0002244)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
      negative regulation of cell proliferation (GO:0008285)
      negative regulation of gene expression (GO:0010629)
      negative regulation of aldosterone biosynthetic process (GO:0032348)
      regulation of ion transmembrane transport (GO:0034765)
      cellular response to drug (GO:0035690)
      positive regulation of apoptotic process (GO:0043065)
      positive regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043280)
      negative regulation by host of viral transcription (GO:0043922)
      negative regulation of neuron differentiation (GO:0045665)
      negative regulation of transcription, DNA-templated (GO:0045892)
      positive regulation of transcription, DNA-templated (GO:0045893)
      negative regulation of calcium ion-dependent exocytosis (GO:0045955)
      negative regulation of insulin secretion (GO:0046676)
      negative regulation of neurogenesis (GO:0050768)
      cardiac muscle cell myoblast differentiation (GO:0060379)
      histone H4 deacetylation (GO:0070933)
      cellular response to electrical stimulus (GO:0071257)
      cellular response to glucocorticoid stimulus (GO:0071385)
      potassium ion transmembrane transport (GO:0071805)
      negative regulation of cortisol biosynthetic process (GO:2000065)
      negative regulation of dense core granule biogenesis (GO:2000706)
      negative regulation of mesenchymal stem cell differentiation (GO:2000740)
      negative regulation of amniotic stem cell differentiation (GO:2000798)
GO_MF
  •   14 Terms
      sequence-specific DNA binding RNA polymerase II transcription factor activity (GO:0000981)
      core promoter sequence-specific DNA binding (GO:0001046)
      core promoter binding (GO:0001047)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001078)
      nucleic acid binding (GO:0003676)
      DNA binding (GO:0003677)
      chromatin binding (GO:0003682)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      outward rectifier potassium channel activity (GO:0015271)
      protein complex binding (GO:0032403)
      transcription regulatory region DNA binding (GO:0044212)
      metal ion binding (GO:0046872)
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018187
(v2.0)		RestNM_01126319712
6.627364.3897115.995124.002117.18426.465222.5083117.108110.68513.6931
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018187
(v2.0)		Rest19712
754/3480.6012491/3480.3795102/3481.7952274/3480.981240/348-1.0448387/348-0.4446
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018187
(v2.0)		Rest19712
405/1311.1096265/1310.895197/1313.0545252/1312.253414/131-1.1139135/131-0.5508
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018187
(v2.0)		Rest19712
95.788519249.89
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018187
(v2.0)		Rest19712
19.0759619.87
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017667
(v1.0)		19589L0283E03-3Mm.117547Rest19712
U042648NAP095075-001Rest;TC853759,TC853758Q60694U,F,23.50493.50293.15913.20512.60423.27173.0514
MOE430 N/A
Agilent44K N/A
Proteome N/A