DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2018847

Gene

Sart3

Synonyms

Description

squamous cell carcinoma antigen recognized by T cells 3

Locus

NM_016926 UCSC: chr5:114192455-114221658(-) OLP: chr5:114192455-114221658(-)

DB links

Entrez 53890
MGI 1858230
Ensembl ENSMUSG00000018974

Feature

protein-coding

GO_BP

5 Terms

GO_MF

4 Terms

GO_CC

3 Terms

KEGG

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2018847 (v2.0)	Sart3	NM_016926	53890	7.01593	85.6629	28.5636	13.8131	10.9325	15.8583	11.0748	32.7457	13.6393	16.9329

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2018847 (v2.0)	Sart3	53890	880/543	0.1834	474/543	-0.3116	339/543	2.8938	818/543	1.9175	13/543	-3.2307	118/543	-2.7858

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2018847 (v2.0)	Sart3	53890	528/204	0.856	261/204	0.2382	325/204	4.194	769/204	3.2299	7/204	-2.6438	68/204	-2.1596

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2018847 (v2.0)	Sart3	53890	117.555	303	38.8

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2018847 (v2.0)	Sart3	53890	22.9615	196	11.72

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018314 (v1.0)	938	C0163A04-3	Mm.29594	Sart3	53890							4.0395	4.0209	3.4758	3.8457	3.4192	3.6156	3.607
0018314 (v1.0)	19715	L0295A04-3	Mm.29594	Sart3	53890	U026591	NAP003299-001	Sart3;	TC858437,TC858436	Q9R0P4	U,F,2	4.2403	4.1722	3.6345	4.0329	3.522	3.7261	3.7452

N/A

N/A

N/A